RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 LDHCP07864 332 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 DACT2Q5SW24 774 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
NLE1-205ENST00000588642 ZNF589Q86UQ0 364 aaPredicted RBP16.87■□□□□ 0.29
NLE1-205ENST00000588642 USP26Q9BXU7 913 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 PUS7LQ9H0K6 701 aaKnown RBP16.87■□□□□ 0.29
NLE1-205ENST00000588642 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 AKAP11Q9UKA4 1901 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 MAST3O60307 1309 aa16.87■□□□□ 0.29
NLE1-205ENST00000588642 F8W031 263 aaPredicted RBP16.86■□□□□ 0.29
NLE1-205ENST00000588642 YBX3P16989 372 aaKnown RBP eCLIP16.86■□□□□ 0.292e-8■■■□□ 19.1
NLE1-205ENST00000588642 FKBP1AP62942 108 aaKnown RBP16.86■□□□□ 0.29
NLE1-205ENST00000588642 GPR162Q16538 588 aa16.86■□□□□ 0.29
NLE1-205ENST00000588642 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
NLE1-205ENST00000588642 CERS5Q8N5B7 392 aa16.86■□□□□ 0.29
NLE1-205ENST00000588642 AIDAQ96BJ3 306 aa16.86■□□□□ 0.29
NLE1-205ENST00000588642 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
NLE1-205ENST00000588642 MAGEB6P1A0A0J9YX57 407 aa16.85■□□□□ 0.29
NLE1-205ENST00000588642 MBD4O95243 580 aa16.85■□□□□ 0.29
NLE1-205ENST00000588642 MIGA1Q8NAN2 632 aa16.85■□□□□ 0.29
NLE1-205ENST00000588642 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
NLE1-205ENST00000588642 C22orf23Q9BZE7 217 aa16.85■□□□□ 0.29
NLE1-205ENST00000588642 LSG1Q9H089 658 aaKnown RBP16.85■□□□□ 0.29
NLE1-205ENST00000588642 TTF2Q9UNY4 1162 aaKnown RBP16.85■□□□□ 0.29
NLE1-205ENST00000588642 PSMD14O00487 310 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 GPAA1O43292 621 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 LMNB1P20700 586 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 PRELPP51888 382 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 PTH1RQ03431 593 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 CXCL9Q07325 125 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 DIXDC1Q155Q3 683 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 ADGRA1Q86SQ6 560 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 NOL10Q9BSC4 688 aaKnown RBP16.84■□□□□ 0.29
NLE1-205ENST00000588642 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
NLE1-205ENST00000588642 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
NLE1-205ENST00000588642 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
NLE1-205ENST00000588642 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
NLE1-205ENST00000588642 TNIP1Q15025 636 aa16.83■□□□□ 0.28
NLE1-205ENST00000588642 CIAPIN1Q6FI81 312 aa16.83■□□□□ 0.28
NLE1-205ENST00000588642 RSBN1LQ6PCB5 846 aaPredicted RBP16.83■□□□□ 0.28
NLE1-205ENST00000588642 STRBPQ96SI9 672 aaKnown RBP16.83■□□□□ 0.28
NLE1-205ENST00000588642 EPB41L2O43491 1005 aaKnown RBP16.82■□□□□ 0.28
NLE1-205ENST00000588642 BAG3O95817 575 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 APPP05067 770 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 MCCP23508 829 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 SCNN1DP51172 638 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 DYNLL1P63167 89 aaKnown RBP16.82■□□□□ 0.28
NLE1-205ENST00000588642 KIAA0825Q8IV33 1275 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 TBC1D32Q96NH3 1257 aa16.82■□□□□ 0.28
NLE1-205ENST00000588642 MROH7-TTC4A0A0A0MT08 1334 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
NLE1-205ENST00000588642 GNAT2P19087 354 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 LCORLQ8N3X6 602 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 FAM163AQ96GL9 167 aaPredicted RBP16.81■□□□□ 0.28
NLE1-205ENST00000588642 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
NLE1-205ENST00000588642 AATFQ9NY61 560 aaKnown RBP eCLIP16.81■□□□□ 0.28
NLE1-205ENST00000588642 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
NLE1-205ENST00000588642 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
NLE1-205ENST00000588642 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
NLE1-205ENST00000588642 FZD9O00144 591 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 GRIN3BO60391 1043 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 RIOK1Q9BRS2 568 aaKnown RBP16.8■□□□□ 0.28
NLE1-205ENST00000588642 SLC4A4Q9Y6R1 1079 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 COL4A5P29400 1685 aa16.8■□□□□ 0.28
NLE1-205ENST00000588642 GPR75-ASB3A0A0A6YYF3 556 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 BTDP43251 543 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
NLE1-205ENST00000588642 PPP4CP60510 307 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
NLE1-205ENST00000588642 HHIPL2Q6UWX4 724 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 CRNKL1Q9BZJ0 848 aaKnown RBP16.79■□□□□ 0.28
NLE1-205ENST00000588642 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
NLE1-205ENST00000588642 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
NLE1-205ENST00000588642 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 GAKO14976 1311 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 PRKAB2O43741 272 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 PLCG2P16885 1265 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 CRKP46108 304 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 RBM25P49756 843 aaKnown RBP16.78■□□□□ 0.28
NLE1-205ENST00000588642 CERS3Q8IU89 383 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 OGFOD1Q8N543 542 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 GMLQ99445 158 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
NLE1-205ENST00000588642 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
NLE1-205ENST00000588642 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.28
NLE1-205ENST00000588642 HSPA4P34932 840 aa16.77■□□□□ 0.28
NLE1-205ENST00000588642 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
NLE1-205ENST00000588642 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
NLE1-205ENST00000588642 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms