RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ATP2B3Q16720 1220 aa17.43■□□□□ 0.38
CCDC43-203ENST00000588210 CAVIN4Q5BKX8 364 aa17.43■□□□□ 0.38
CCDC43-203ENST00000588210 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-203ENST00000588210 FAM84BQ96KN1 310 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-203ENST00000588210 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
CCDC43-203ENST00000588210 HIBADHP31937 336 aaKnown RBP17.43■□□□□ 0.38
CCDC43-203ENST00000588210 CHAMP1Q96JM3 812 aa17.43■□□□□ 0.38
CCDC43-203ENST00000588210 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
CCDC43-203ENST00000588210 WDR90Q96KV7 1748 aa17.42■□□□□ 0.38
CCDC43-203ENST00000588210 IL1R1P14778 569 aa17.42■□□□□ 0.38
CCDC43-203ENST00000588210 CNTROBQ8N137 903 aa17.42■□□□□ 0.38
CCDC43-203ENST00000588210 KCNQ5Q9NR82 932 aa17.42■□□□□ 0.38
CCDC43-203ENST00000588210 PSMD14O00487 310 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 GYG1P46976 350 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 FBXO33Q7Z6M2 555 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 TTC41PQ6P2S7 1318 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 USP17L3A6NCW0 530 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 USP17L4A6NCW7 530 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-203ENST00000588210 NOL8Q76FK4 1167 aaKnown RBP17.41■□□□□ 0.38
CCDC43-203ENST00000588210 USP17L1Q7RTZ2 530 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-203ENST00000588210 LSG1Q9H089 658 aaKnown RBP17.41■□□□□ 0.38
CCDC43-203ENST00000588210 RRAGCQ9HB90 399 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 WDR33Q9C0J8 1336 aaKnown RBP17.41■□□□□ 0.38
CCDC43-203ENST00000588210 SCN9AQ15858 1988 aa17.41■□□□□ 0.38
CCDC43-203ENST00000588210 VIL1P09327 827 aaKnown RBP17.4■□□□□ 0.38
CCDC43-203ENST00000588210 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-203ENST00000588210 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 SYCE3A1L190 88 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 IQCA1LA6NCM1 817 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 TIMM10P62072 90 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
CCDC43-203ENST00000588210 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
CCDC43-203ENST00000588210 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-203ENST00000588210 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-203ENST00000588210 PSME4Q14997 1843 aa17.39■□□□□ 0.37
CCDC43-203ENST00000588210 POTECB2RU33 542 aa17.39■□□□□ 0.37
CCDC43-203ENST00000588210 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.37
CCDC43-203ENST00000588210 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
CCDC43-203ENST00000588210 TTC14Q96N46 770 aa17.39■□□□□ 0.37
CCDC43-203ENST00000588210 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-203ENST00000588210 BCAMP50895 628 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 DPF2Q92785 391 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 SYAP1Q96A49 352 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-203ENST00000588210 SCN4AP35499 1836 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 GLRX3O76003 335 aaKnown RBP17.38■□□□□ 0.37
CCDC43-203ENST00000588210 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-203ENST00000588210 SCNN1DP51172 638 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 GTF2IP78347 998 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 RSBN1LQ6PCB5 846 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-203ENST00000588210 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
CCDC43-203ENST00000588210 ZNF609O15014 1411 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 MSNP26038 577 aaKnown RBP17.37■□□□□ 0.37
CCDC43-203ENST00000588210 GMPSP49915 693 aaPredicted RBP17.37■□□□□ 0.37
CCDC43-203ENST00000588210 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 DACT2Q5SW24 774 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
CCDC43-203ENST00000588210 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 MYO3BQ8WXR4 1341 aa17.37■□□□□ 0.37
CCDC43-203ENST00000588210 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
CCDC43-203ENST00000588210 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
CCDC43-203ENST00000588210 GPRC5DQ9NZD1 345 aa17.36■□□□□ 0.37
CCDC43-203ENST00000588210 ARAP2Q8WZ64 1704 aa17.36■□□□□ 0.37
CCDC43-203ENST00000588210 KIF3CO14782 793 aa17.36■□□□□ 0.37
CCDC43-203ENST00000588210 ZBTB22O15209 634 aa17.36■□□□□ 0.37
CCDC43-203ENST00000588210 FAM205AQ6ZU69 1335 aa17.35■□□□□ 0.37
CCDC43-203ENST00000588210 ADORA1P30542 326 aa17.35■□□□□ 0.37
CCDC43-203ENST00000588210 FKBP1AP62942 108 aaKnown RBP17.35■□□□□ 0.37
CCDC43-203ENST00000588210 KIAA1211Q6ZU35 1233 aa17.35■□□□□ 0.37
CCDC43-203ENST00000588210 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
CCDC43-203ENST00000588210 CCDC102BQ68D86 513 aa17.35■□□□□ 0.37
CCDC43-203ENST00000588210 GMLQ99445 158 aa17.35■□□□□ 0.37
CCDC43-203ENST00000588210 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
CCDC43-203ENST00000588210 CNOT7Q9UIV1 285 aaKnown RBP17.35■□□□□ 0.37
CCDC43-203ENST00000588210 EPHX2P34913 555 aa17.34■□□□□ 0.37
CCDC43-203ENST00000588210 EPS15P42566 896 aa17.34■□□□□ 0.37
CCDC43-203ENST00000588210 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
CCDC43-203ENST00000588210 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
CCDC43-203ENST00000588210 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
CCDC43-203ENST00000588210 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
CCDC43-203ENST00000588210 IQSEC3Q9UPP2 1182 aaPredicted RBP17.34■□□□□ 0.37
CCDC43-203ENST00000588210 ZNF646O15015 1829 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-203ENST00000588210 H7C1D1 291 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 SEMA3EO15041 775 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 TPM2P07951 284 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 PHKA1P46020 1223 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 AK2P54819 239 aa17.33■□□□□ 0.37
CCDC43-203ENST00000588210 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.37
CCDC43-203ENST00000588210 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.37
CCDC43-203ENST00000588210 GPATCH3Q96I76 525 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms