RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 C7P10643 843 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 PLCG2P16885 1265 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 COL9A1P20849 921 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 NEK4P51957 841 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 EIF5P55010 431 aaKnown RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 TEFQ10587 303 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 CAMK2BQ13554 666 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 TPD52L1Q16890 204 aaPredicted RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 CEP135Q66GS9 1140 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 PRPF40BQ6NWY9 871 aaKnown RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 USP48Q86UV5 1035 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 ZGPATQ8N5A5 531 aaKnown RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 CNBD1Q8NA66 436 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 ZNF830Q96NB3 372 aaPredicted RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 SETDB2Q96T68 719 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 RASSF4Q9H2L5 321 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 GEMIN8Q9NWZ8 242 aaKnown RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
TVP23C-208ENST00000581273 ZNF541Q9H0D2 1346 aa8.78□□□□□ -1
TVP23C-208ENST00000581273 CLGNO14967 610 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 TRPA1O75762 1119 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SLU7O95391 586 aaKnown RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 A1BGP04217 495 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 HCLS1P14317 486 aaPredicted RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 CYP2C19P33261 490 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 ST5P78524 1137 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SAPCD2Q86UD0 394 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 DRC7Q8IY82 874 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 OTUD5Q96G74 571 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 DDX27Q96GQ7 796 aaKnown RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SRRTQ9BXP5 876 aaKnown RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SRCIN1Q9C0H9 1055 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 KCND1Q9NSA2 647 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SPTBN5Q9NRC6 3674 aaKnown RBP8.77□□□□□ -1.01
TVP23C-208ENST00000581273 MRC1P22897 1456 aa8.77□□□□□ -1.01
TVP23C-208ENST00000581273 SCN7AQ01118 1682 aa8.76□□□□□ -1.01
TVP23C-208ENST00000581273 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
TVP23C-208ENST00000581273 U2SURPO15042 1029 aaKnown RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 GSPT1P15170 499 aaKnown RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 PTPN14Q15678 1187 aa8.76□□□□□ -1.01
TVP23C-208ENST00000581273 PNMA8AQ86V59 439 aaPredicted RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 NBPF5PQ86XG9 351 aaPredicted RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 ANKRD44Q8N8A2 993 aa8.76□□□□□ -1.01
TVP23C-208ENST00000581273 TSR2Q969E8 191 aaKnown RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 KIF1BPQ96EK5 621 aa8.76□□□□□ -1.01
TVP23C-208ENST00000581273 ZNF277Q9NRM2 450 aaPredicted RBP8.76□□□□□ -1.01
TVP23C-208ENST00000581273 KIAA0100Q14667 2235 aaKnown RBP8.75□□□□□ -1.01
TVP23C-208ENST00000581273 SRGNP10124 158 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 SDSP20132 328 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 GSDMDP57764 484 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 PKP1Q13835 747 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 ZNF790Q6PG37 636 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 OLFM4Q6UX06 510 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
TVP23C-208ENST00000581273 SYNE4Q8N205 404 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 TSC1Q92574 1164 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 MASTLQ96GX5 879 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 ZSCAN31Q96LW9 406 aaPredicted RBP8.75□□□□□ -1.01
TVP23C-208ENST00000581273 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 FUCA2Q9BTY2 467 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 TEX13AQ9BXU3 409 aaPredicted RBP8.75□□□□□ -1.01
TVP23C-208ENST00000581273 DDX19AQ9NUU7 478 aaKnown RBP8.75□□□□□ -1.01
TVP23C-208ENST00000581273 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 PYCARDQ9ULZ3 195 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 AKAP11Q9UKA4 1901 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 AOX1Q06278 1338 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 RAD50Q92878 1312 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 CENPFP49454 3210 aa8.75□□□□□ -1.01
TVP23C-208ENST00000581273 RPAP1Q9BWH6 1393 aaPredicted RBP8.74□□□□□ -1.01
TVP23C-208ENST00000581273 HEG1Q9ULI3 1381 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 SIPA1L3O60292 1781 aaPredicted RBP8.74□□□□□ -1.01
TVP23C-208ENST00000581273 GNAT3A8MTJ3 354 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 H0YGN5 161 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 KCNQ3O43525 872 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 CAMTA2O94983 1202 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 CELF2O95319 508 aaKnown RBP8.74□□□□□ -1.01
TVP23C-208ENST00000581273 IVLP07476 585 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 PDCP20941 246 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 IL6STP40189 918 aaPredicted RBP8.74□□□□□ -1.01
TVP23C-208ENST00000581273 SOGA3Q5TF21 947 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 IL17REQ8NFR9 667 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 FMNL2Q96PY5 1086 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 TRIM34Q9BYJ4 488 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 NUP62CLQ9H1M0 184 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
TVP23C-208ENST00000581273 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms