RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 MAP3K12Q12852 859 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CCDC73Q6ZRK6 1079 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CCAR1Q8IX12 1150 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 AIDAQ96BJ3 306 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 C8orf76Q96K31 380 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 STRBPQ96SI9 672 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MPHOSPH8Q99549 860 aa10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ORC3Q9UBD5 711 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MYO5AQ9Y4I1 1855 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FAM177BA6PVY3 158 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CPLX1O14810 134 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 APPP05067 770 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TERF1P54274 439 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GUCY1B3Q02153 619 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CEBPZQ03701 1054 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 KIAA2012Q0VF49 1180 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CYB5R4Q7L1T6 521 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TDRD7Q8NHU6 1098 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 TMEM87BQ96K49 555 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CBX8Q9HC52 389 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ANGEL1Q9UNK9 670 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
CDK5RAP3-208ENST00000578525 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 AP5Z1O43299 807 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CDKL5O76039 1030 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MBD4O95243 580 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CAVIN2O95810 425 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GNAT2P19087 354 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 BRAPQ7Z569 592 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MAGEB6Q8N7X4 407 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CDC5LQ99459 802 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FTOQ9C0B1 505 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NIP7Q9Y221 180 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
CDK5RAP3-208ENST00000578525 A0A1B0GUL6 1792 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NEDD4P46934 1319 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 PNPLA7Q6ZV29 1317 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 A0A1W2PQ27 194 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 A0A1W2PQ64 194 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 A0A1W2PQD8 194 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 GOLGA6L6A8MZA4 724 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 RGL2O15211 777 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 YEATS4O95619 227 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 METAP2P50579 478 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FAM160A1Q05DH4 1040 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CPLX2Q6PUV4 134 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 RAB11FIP4Q86YS3 637 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 IFNL3Q8IZI9 196 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FSIP1Q8NA03 581 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 FBXO18Q8NFZ0 1043 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NAPBQ9H115 298 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 CNNM2Q9H8M5 875 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ARMT1Q9H993 441 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 ECM29Q5VYK3 1845 aa10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-208ENST00000578525 NUTM2BA6NNL0 878 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NUTM2EB1AL46 878 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 B4E1Z4 1266 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PPFIA3O75145 1194 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ME1P48163 572 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CHRNDQ07001 517 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 STK38Q15208 465 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 STX1AQ16623 288 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 OTUD7BQ6GQQ9 843 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 APOA5Q6Q788 366 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CLEC4GQ6UXB4 293 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 LUZP1Q86V48 1076 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NUTM2AQ8IVF1 878 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ENGASEQ8NFI3 743 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KCNG4Q8TDN1 519 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 PIBF1Q8WXW3 757 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ALG1Q9BT22 464 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KRT23Q9C075 422 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 NID2Q14112 1375 aa10.89□□□□□ -0.67
CDK5RAP3-208ENST00000578525 STK36Q9NRP7 1315 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 CHD4Q14839 1912 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 GSG1L2A8MUP6 293 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZBTB43O43298 467 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZNF165P49910 485 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 BCAMP50895 628 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 ZNF75DP51815 510 aa10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 KIF23Q02241 960 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-208ENST00000578525 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms