RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
IFT20-206ENST00000578122 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
IFT20-206ENST00000578122 SMC1BQ8NDV3 1235 aa18.87■□□□□ 0.61
IFT20-206ENST00000578122 MYOZ2Q9NPC6 264 aa18.87■□□□□ 0.61
IFT20-206ENST00000578122 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
IFT20-206ENST00000578122 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
IFT20-206ENST00000578122 PDS5AQ29RF7 1337 aaKnown RBP18.86■□□□□ 0.61
IFT20-206ENST00000578122 EGFRP00533 1210 aa18.86■□□□□ 0.61
IFT20-206ENST00000578122 GRIK5Q16478 980 aa18.86■□□□□ 0.61
IFT20-206ENST00000578122 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
IFT20-206ENST00000578122 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
IFT20-206ENST00000578122 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
IFT20-206ENST00000578122 SCARF1Q14162 830 aa18.85■□□□□ 0.61
IFT20-206ENST00000578122 SPATA5Q8NB90 893 aa18.85■□□□□ 0.61
IFT20-206ENST00000578122 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
IFT20-206ENST00000578122 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
IFT20-206ENST00000578122 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
IFT20-206ENST00000578122 MCAMP43121 646 aa18.84■□□□□ 0.61
IFT20-206ENST00000578122 FSTL1Q12841 308 aa18.84■□□□□ 0.61
IFT20-206ENST00000578122 ZGPATQ8N5A5 531 aaKnown RBP18.84■□□□□ 0.61
IFT20-206ENST00000578122 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
IFT20-206ENST00000578122 IGHDP01880 384 aa18.83■□□□□ 0.6
IFT20-206ENST00000578122 DLGAP5Q15398 846 aa18.83■□□□□ 0.6
IFT20-206ENST00000578122 PI16Q6UXB8 463 aa18.83■□□□□ 0.6
IFT20-206ENST00000578122 SNRKQ9NRH2 765 aa18.83■□□□□ 0.6
IFT20-206ENST00000578122 MAST3O60307 1309 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
IFT20-206ENST00000578122 C1QTNF8P60827 252 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 CFAP100Q494V2 611 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 MAP1SQ66K74 1059 aaPredicted RBP18.82■□□□□ 0.6
IFT20-206ENST00000578122 MTMR14Q8NCE2 650 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
IFT20-206ENST00000578122 ABCF2Q9UG63 623 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
IFT20-206ENST00000578122 RBM5P52756 815 aaKnown RBP eCLIP18.81■□□□□ 0.6
IFT20-206ENST00000578122 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
IFT20-206ENST00000578122 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
IFT20-206ENST00000578122 SPTY2D1Q68D10 685 aaPredicted RBP18.81■□□□□ 0.6
IFT20-206ENST00000578122 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
IFT20-206ENST00000578122 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
IFT20-206ENST00000578122 ZBED3Q96IU2 234 aaPredicted RBP18.81■□□□□ 0.6
IFT20-206ENST00000578122 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
IFT20-206ENST00000578122 ECM29Q5VYK3 1845 aa18.81■□□□□ 0.6
IFT20-206ENST00000578122 MYH2Q9UKX2 1941 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 ASTN2O75129 1339 aaPredicted RBP18.8■□□□□ 0.6
IFT20-206ENST00000578122 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
IFT20-206ENST00000578122 C19orf67A6NJJ6 358 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 WNT10BO00744 389 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 PRDX5P30044 214 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 ZAP70P43403 619 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 CRKP46108 304 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 TBC1D9Q6ZT07 1266 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 MRIQ9BWK5 157 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
IFT20-206ENST00000578122 NEFLP07196 543 aa18.79■□□□□ 0.6
IFT20-206ENST00000578122 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
IFT20-206ENST00000578122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.79■□□□□ 0.6
IFT20-206ENST00000578122 TEKT1Q969V4 418 aa18.79■□□□□ 0.6
IFT20-206ENST00000578122 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
IFT20-206ENST00000578122 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
IFT20-206ENST00000578122 GGA3Q9NZ52 723 aa18.79■□□□□ 0.6
IFT20-206ENST00000578122 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
IFT20-206ENST00000578122 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
IFT20-206ENST00000578122 ATP5JP18859 108 aa18.78■□□□□ 0.6
IFT20-206ENST00000578122 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
IFT20-206ENST00000578122 HHIPL2Q6UWX4 724 aa18.78■□□□□ 0.6
IFT20-206ENST00000578122 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
IFT20-206ENST00000578122 DZIP1Q86YF9 867 aaKnown RBP18.77■□□□□ 0.6
IFT20-206ENST00000578122 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
IFT20-206ENST00000578122 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
IFT20-206ENST00000578122 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
IFT20-206ENST00000578122 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 MYO1BO43795 1136 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 CDC37L1Q7L3B6 337 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 KRT26Q7Z3Y9 468 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
IFT20-206ENST00000578122 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 PIH1D3Q9NQM4 214 aaKnown RBP18.76■□□□□ 0.59
IFT20-206ENST00000578122 ECHDC1Q9NTX5 307 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 RAI14Q9P0K7 980 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
IFT20-206ENST00000578122 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
IFT20-206ENST00000578122 MECOMQ03112 1051 aa18.75■□□□□ 0.59
IFT20-206ENST00000578122 SULF1Q8IWU6 871 aa18.75■□□□□ 0.59
IFT20-206ENST00000578122 SLF2Q8IX21 1173 aa18.75■□□□□ 0.59
IFT20-206ENST00000578122 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
IFT20-206ENST00000578122 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
IFT20-206ENST00000578122 DAGLAQ9Y4D2 1042 aa18.75■□□□□ 0.59
IFT20-206ENST00000578122 AOX1Q06278 1338 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 ADM5C9JUS6 153 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 TRAF5O00463 557 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 GSTO1P78417 241 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 NUCB1Q02818 461 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 APOBEC3FQ8IUX4 373 aaKnown RBP18.74■□□□□ 0.59
IFT20-206ENST00000578122 HAUS7Q99871 368 aa18.74■□□□□ 0.59
IFT20-206ENST00000578122 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms