RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GATA4P43694 442 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 GRIA4P48058 902 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 PCDH1Q08174 1060 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 CCDC85BQ15834 202 aaPredicted RBP4.12□□□□□ -1.75
COPS3-213ENST00000577210 GRIK5Q16478 980 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 RSPO4Q2I0M5 234 aaPredicted RBP4.12□□□□□ -1.75
COPS3-213ENST00000577210 PI16Q6UXB8 463 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 RELL1Q8IUW5 271 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 BACH2Q9BYV9 841 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 LACRTQ9GZZ8 138 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 SEMA6BQ9H3T3 888 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 TPSG1Q9NRR2 321 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 TRIM33Q9UPN9 1127 aa4.12□□□□□ -1.75
COPS3-213ENST00000577210 ELNP15502 786 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 RPS26P62854 115 aaKnown RBP4.11□□□□□ -1.75
COPS3-213ENST00000577210 NRG1Q02297 640 aaPredicted RBP4.11□□□□□ -1.75
COPS3-213ENST00000577210 GRIK4Q16099 956 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 FOXD4L6Q3SYB3 417 aaPredicted RBP4.11□□□□□ -1.75
COPS3-213ENST00000577210 FOXD4L3Q6VB84 417 aaPredicted RBP4.11□□□□□ -1.75
COPS3-213ENST00000577210 VN1R5Q7Z5H4 357 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 C3orf58Q8NDZ4 430 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 SPATA32Q96LK8 384 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 SETDB2Q96T68 719 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 CORO1BQ9BR76 489 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 RSRP1Q9BUV0 290 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 CYP8B1Q9UNU6 501 aa4.11□□□□□ -1.75
COPS3-213ENST00000577210 UNCXA6NJT0 531 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 FSCN2O14926 492 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 RECKO95980 971 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 APBA3O96018 575 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 ESRRAP11474 423 aaPredicted RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 ACPPP15309 386 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 NME2P22392 152 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 TAGLNQ01995 201 aaKnown RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 GNL2Q13823 731 aaKnown RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 NKAPLQ5M9Q1 402 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 IGF2-ASQ6U949 168 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 CCDC84Q86UT8 332 aaPredicted RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 FBXO11Q86XK2 927 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 DMRTC2Q8IXT2 367 aaPredicted RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 FAM161BQ96MY7 647 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 NECAB3Q96P71 396 aaPredicted RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 MRPL18Q9H0U6 180 aaKnown RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 KRT82Q9NSB4 513 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 KIAA1522Q9P206 1035 aaPredicted RBP4.1□□□□□ -1.75
COPS3-213ENST00000577210 GGT7Q9UJ14 662 aa4.1□□□□□ -1.75
COPS3-213ENST00000577210 LINC01387J3KSC0 135 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 EPHA1P21709 976 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 CD68P34810 354 aaPredicted RBP4.09□□□□□ -1.75
COPS3-213ENST00000577210 SPRED3Q2MJR0 410 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 TPTE2Q6XPS3 522 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 FMR1NBQ8N0W7 255 aaPredicted RBP4.09□□□□□ -1.75
COPS3-213ENST00000577210 SLC7A3Q8WY07 619 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 HHIPQ96QV1 700 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 SH2B1Q9NRF2 756 aaPredicted RBP4.09□□□□□ -1.75
COPS3-213ENST00000577210 SYNGAP1Q96PV0 1343 aa4.09□□□□□ -1.75
COPS3-213ENST00000577210 A0A0A0MRY4 1105 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 METTL12A8MUP2 240 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 C9orf172C9J069 976 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 SOX1O00570 391 aaPredicted RBP4.08□□□□□ -1.76
COPS3-213ENST00000577210 DYRK3O43781 588 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 TRPA1O75762 1119 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 CTSHP09668 335 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 SLFN14P0C7P3 912 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 SELPP16109 830 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 ARNTP27540 789 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 FANCCQ00597 558 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 GSTM4Q03013 218 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 POU4F3Q15319 338 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 ZMYM1Q5SVZ6 1142 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 SHISA2Q6UWI4 295 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 ILDR2Q71H61 639 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 SULF2Q8IWU5 870 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 ZNF654Q8IZM8 581 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 ROBO2Q9HCK4 1378 aa4.08□□□□□ -1.76
COPS3-213ENST00000577210 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.08□□□□□ -1.76
COPS3-213ENST00000577210 TRIM37O94972 964 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 GSTP1P09211 210 aaKnown RBP4.07□□□□□ -1.76
COPS3-213ENST00000577210 LIG3P49916 1009 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 MBTPS1Q14703 1052 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 SETDB1Q15047 1291 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 DUOXA2Q1HG44 320 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 ZNF423Q2M1K9 1284 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 MEI1Q5TIA1 1274 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 TTBK2Q6IQ55 1244 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 LLGL2Q6P1M3 1020 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 VPS37DQ86XT2 251 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 TMEM130Q8N3G9 435 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 TMEM74Q96NL1 305 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 CEP41Q9BYV8 373 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 TGIF2Q9GZN2 237 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 RNF208Q9H0X6 261 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 MIR1-1HGQ9H1L0 117 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 CCSER2Q9H7U1 834 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 CYP4F12Q9HCS2 524 aa4.07□□□□□ -1.76
COPS3-213ENST00000577210 MEGF11A6BM72 1044 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 DLL1O00548 723 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 ENC1O14682 589 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 BPNT1O95861 308 aa4.06□□□□□ -1.76
COPS3-213ENST00000577210 ERCC5P28715 1186 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms