RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
NPLOC4-219ENST00000576713 LTBP3Q9NS15 1303 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 ACTN4O43707 911 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 BBOX1O75936 387 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 ITGA6P23229 1130 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 GJA5P36382 358 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 GPSM2P81274 684 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 SP8Q8IXZ3 490 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 TAOK3Q9H2K8 898 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
NPLOC4-219ENST00000576713 APLP1P51693 650 aa11.91□□□□□ -0.5
NPLOC4-219ENST00000576713 PRR14Q9BWN1 585 aa11.91□□□□□ -0.5
NPLOC4-219ENST00000576713 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 SNAP23O00161 211 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 LMNB1P20700 586 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 KLHDC4Q8TBB5 520 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 HLA-CQ95604 372 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 PSMD1Q99460 953 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 CHMP3Q9Y3E7 222 aa11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-219ENST00000576713 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 DZIP1LQ8IYY4 767 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 RTKN2Q8IZC4 609 aa11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 MINPP1Q9UNW1 487 aa11.89□□□□□ -0.51
NPLOC4-219ENST00000576713 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 FDX1P10109 184 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 IARSP41252 1262 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 AOC3Q16853 763 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 MPNDQ8N594 471 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 C1orf115Q9H7X2 142 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 PCDHB15Q9Y5E8 787 aa11.88□□□□□ -0.51
NPLOC4-219ENST00000576713 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 KLRK1P26718 216 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 SPNS2Q8IVW8 549 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 CDC5LQ99459 802 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 PCDHGC3Q9UN70 934 aa11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
NPLOC4-219ENST00000576713 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 TAF5LO75529 589 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 MORN1Q5T089 497 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 COG6Q9Y2V7 657 aa11.86□□□□□ -0.51
NPLOC4-219ENST00000576713 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 PTPN5P54829 565 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 CHRNDQ07001 517 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 CCDC57Q2TAC2 916 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 KCNQ5Q9NR82 932 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 XDHP47989 1333 aa11.85□□□□□ -0.51
NPLOC4-219ENST00000576713 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 POTECB2RU33 542 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 FZD9O00144 591 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 UFL1O94874 794 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
NPLOC4-219ENST00000576713 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms