RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 CTAGE9A4FU28 777 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 MVPQ14764 893 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 TRIM68Q6AZZ1 485 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 PICK1Q9NRD5 415 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 ZC4H2Q9NQZ6 224 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 CYLC1P35663 651 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 WDR48Q8TAF3 677 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 DHX58Q96C10 678 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 RIOK1Q9BRS2 568 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 SCAND2PQ9GZW5 306 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 PLEKHA4Q9H4M7 779 aa17.79■□□□□ 0.44
CACNA1A-202ENST00000573710 CACNA2D3Q8IZS8 1091 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 GBP1P32455 592 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 CCDC102BQ68D86 513 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 GUCA1BQ9UMX6 200 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 GON4LQ3T8J9 2241 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 CETN3O15182 167 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 FOXO3O43524 673 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 TRPC3Q13507 836 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 OPHN1O60890 802 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 EIF6P56537 245 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 KIF9Q9HAQ2 790 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 LUC7L2Q9Y383 392 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 WDR44Q5JSH3 913 aa17.78■□□□□ 0.44
CACNA1A-202ENST00000573710 OATP04181 439 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 PHEXP78562 749 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 DNAI1Q9UI46 699 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 TPX2Q9ULW0 747 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 STX17P56962 302 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 UBXN1Q04323 297 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 TACO1Q9BSH4 297 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 MCUR1Q96AQ8 359 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 NEK11Q8NG66 645 aa17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-202ENST00000573710 TRIM31Q9BZY9 425 aa17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 NFKBIL1Q9UBC1 381 aaPredicted RBP17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 CTAGE15A4D2H0 777 aa17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 CTAGE5O15320 804 aa17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 CTAGE8P0CG41 777 aa17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 CTAGE4Q8IX94 777 aa17.77■□□□□ 0.43
CACNA1A-202ENST00000573710 MED10Q9BTT4 135 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 LZTFL1Q9NQ48 299 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 ZSCAN32Q9NX65 697 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 RNF8O76064 485 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 PDE6AP16499 860 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 UTP14CQ5TAP6 766 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 VCXQ9H320 206 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 RAP1GDS1P52306 607 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 BAG2O95816 211 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 IVNS1ABPQ9Y6Y0 642 aa17.76■□□□□ 0.43
CACNA1A-202ENST00000573710 PALM3A6NDB9 673 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 KANK3Q6NY19 840 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 STK10O94804 968 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 EHBP1Q8NDI1 1231 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 RTN1Q16799 776 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 AFAP1L2Q8N4X5 818 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 IFT74Q96LB3 600 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 MIER3Q7Z3K6 550 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 MAGED2Q9UNF1 606 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 FYB2Q5VWT5 728 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 NR1H4Q96RI1 486 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-202ENST00000573710 M0QZ92 97 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 SESN3P58005 492 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 SEL1L2Q5TEA6 688 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 NUB1Q9Y5A7 615 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 SETD1BQ9UPS6 1966 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 CLNS1AP54105 237 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 CEP128Q6ZU80 1094 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 ZBBXA8MT70 800 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 SPOPO43791 374 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 GPCPD1Q9NPB8 672 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 GSDMDP57764 484 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 KLF18A0A0U1RQI7 1052 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 GSTA1P08263 222 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 GSTA2P09210 222 aa17.74■□□□□ 0.43
CACNA1A-202ENST00000573710 MCM4P33991 863 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms