RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
CLK3-224ENST00000568605 CLASRPQ8N2M8 674 aaKnown RBP15.94■□□□□ 0.14
CLK3-224ENST00000568605 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 TRAF5O00463 557 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 CRKP46108 304 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 TNFAIP1Q13829 316 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 RHPN1Q8TCX5 695 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 ZBED3Q96IU2 234 aaPredicted RBP15.93■□□□□ 0.14
CLK3-224ENST00000568605 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 ZNF408Q9H9D4 720 aa15.93■□□□□ 0.14
CLK3-224ENST00000568605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
CLK3-224ENST00000568605 ASTN2O75129 1339 aaPredicted RBP15.93■□□□□ 0.14
CLK3-224ENST00000568605 APBB1O00213 710 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 CELF2O95319 508 aaKnown RBP15.92■□□□□ 0.14
CLK3-224ENST00000568605 NF2P35240 595 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 AACSQ86V21 672 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
CLK3-224ENST00000568605 SLF2Q8IX21 1173 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 SPATA5Q8NB90 893 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 DBNDD2Q9BQY9 259 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 TMOD2Q9NZR1 351 aa15.92■□□□□ 0.14
CLK3-224ENST00000568605 ABT1Q9ULW3 272 aaKnown RBP15.92■□□□□ 0.14
CLK3-224ENST00000568605 HHIPL2Q6UWX4 724 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
CLK3-224ENST00000568605 CDCA5Q96FF9 252 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 ZNF512BQ96KM6 892 aaPredicted RBP15.91■□□□□ 0.14
CLK3-224ENST00000568605 MRIQ9BWK5 157 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 VEZTQ9HBM0 779 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 ABCF2Q9UG63 623 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 DBNLQ9UJU6 430 aaKnown RBP15.91■□□□□ 0.14
CLK3-224ENST00000568605 PPP2R3BQ9Y5P8 575 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 MYH1P12882 1939 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 MYH8P13535 1937 aa15.91■□□□□ 0.14
CLK3-224ENST00000568605 CNTNAP1P78357 1384 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 IFIT2P09913 472 aaKnown RBP15.9■□□□□ 0.14
CLK3-224ENST00000568605 PRDX5P30044 214 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 MCAMP43121 646 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 TNNI2P48788 182 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 SPDYE2Q495Y8 402 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 ERICH6Q7L0X2 663 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 ZDHHC15Q96MV8 337 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 LRRCC1Q9C099 1032 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 IL1RAPL2Q9NP60 686 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 HMG20BQ9P0W2 317 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 NAV1Q8NEY1 1877 aa15.9■□□□□ 0.14
CLK3-224ENST00000568605 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
CLK3-224ENST00000568605 HTRA3P83110 453 aa15.89■□□□□ 0.13
CLK3-224ENST00000568605 GRIK5Q16478 980 aa15.89■□□□□ 0.13
CLK3-224ENST00000568605 C2orf69Q8N8R5 385 aa15.89■□□□□ 0.13
CLK3-224ENST00000568605 PRMT6Q96LA8 375 aaPredicted RBP15.89■□□□□ 0.13
CLK3-224ENST00000568605 CCDC8Q9H0W5 538 aaPredicted RBP15.89■□□□□ 0.13
CLK3-224ENST00000568605 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
CLK3-224ENST00000568605 ATAD5Q96QE3 1844 aa15.89■□□□□ 0.13
CLK3-224ENST00000568605 RASSF10A6NK89 507 aa15.88■□□□□ 0.13
CLK3-224ENST00000568605 IGSF3O75054 1194 aa15.88■□□□□ 0.13
CLK3-224ENST00000568605 GSTO1P78417 241 aa15.88■□□□□ 0.13
CLK3-224ENST00000568605 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLK3-224ENST00000568605 GBA2Q9HCG7 927 aaPredicted RBP15.88■□□□□ 0.13
CLK3-224ENST00000568605 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
CLK3-224ENST00000568605 TLL2Q9Y6L7 1015 aa15.88■□□□□ 0.13
CLK3-224ENST00000568605 CEP350Q5VT06 3117 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 FKBP1BP68106 108 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 CST9Q5W186 159 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
CLK3-224ENST00000568605 HHIPL1Q96JK4 782 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 TDRD3Q9H7E2 651 aaKnown RBP15.87■□□□□ 0.13
CLK3-224ENST00000568605 LRP2BPQ9P2M1 347 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 ZNF70Q9UC06 446 aaPredicted RBP15.87■□□□□ 0.13
CLK3-224ENST00000568605 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
CLK3-224ENST00000568605 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
CLK3-224ENST00000568605 RPAP1Q9BWH6 1393 aaPredicted RBP15.87■□□□□ 0.13
CLK3-224ENST00000568605 ECE1P42892 770 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 DIXDC1Q155Q3 683 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 PI16Q6UXB8 463 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 GPATCH3Q96I76 525 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 NOL10Q9BSC4 688 aaKnown RBP15.86■□□□□ 0.13
CLK3-224ENST00000568605 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 DEFB129Q9H1M3 183 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 DCTPP1Q9H773 170 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 RAI14Q9P0K7 980 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
CLK3-224ENST00000568605 DAGLAQ9Y4D2 1042 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 MROH7-TTC4A0A0A0MT08 1334 aa15.86■□□□□ 0.13
CLK3-224ENST00000568605 DOCK1Q14185 1865 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 LDHCP07864 332 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 HUNKP57058 714 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 TTLL12Q14166 644 aaPredicted RBP15.85■□□□□ 0.13
CLK3-224ENST00000568605 FKBP1CQ5VVH2 108 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 SAPCD2Q86UD0 394 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 GAKO14976 1311 aa15.85■□□□□ 0.13
CLK3-224ENST00000568605 MECOMQ03112 1051 aa15.84■□□□□ 0.13
CLK3-224ENST00000568605 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
CLK3-224ENST00000568605 SUPT20HL1Q3ZLR7 823 aa15.84■□□□□ 0.13
CLK3-224ENST00000568605 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
CLK3-224ENST00000568605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLK3-224ENST00000568605 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms