RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 EXOC5O00471 708 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 TADA3O75528 432 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 TBC1D8O95759 1140 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 IGKV5-2P06315 115 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 TPM1P09493 284 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 CPA1P15085 419 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 ADD1P35611 737 aaKnown RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 PTH1RQ03431 593 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 TSGA10IPQ3SY00 556 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 CCDC158Q5M9N0 1113 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 KSR2Q6VAB6 950 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 SYT10Q6XYQ8 523 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 REM2Q8IYK8 340 aaPredicted RBP6.34□□□□□ -1.39
LINC01541-202ENST00000568095 CNPY4Q8N129 248 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 ENGASEQ8NFI3 743 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 C8orf37Q96NL8 207 aa6.34□□□□□ -1.39
LINC01541-202ENST00000568095 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.4
LINC01541-202ENST00000568095 EFCAB8A8MWE9 144 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 DHX16O60231 1041 aaKnown RBP6.34□□□□□ -1.4
LINC01541-202ENST00000568095 SASH3O75995 380 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 ANXA1P04083 346 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 ST5P78524 1137 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 MTX1Q13505 466 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 DDB1Q16531 1140 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 TRIM65Q6PJ69 517 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 GOLGA5Q8TBA6 731 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 DDX54Q8TDD1 881 aaKnown RBP6.34□□□□□ -1.4
LINC01541-202ENST00000568095 EXOC4Q96A65 974 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 AKT1S1Q96B36 256 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 KAZALD1Q96I82 304 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.4
LINC01541-202ENST00000568095 USP21Q9UK80 565 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 COL4A1P02462 1669 aa6.34□□□□□ -1.4
LINC01541-202ENST00000568095 MYO1CO00159 1063 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 FANCGO15287 622 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 CYP19A1P11511 503 aaPredicted RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 CASQ1P31415 396 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 SRLQ86TD4 932 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 CCDC150Q8NCX0 1101 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 DNAAF4Q8WXU2 420 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 MAP4K1Q92918 833 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 PCMTD1Q96MG8 357 aaPredicted RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 JAKMIP1Q96N16 626 aaKnown RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 TMOD3Q9NYL9 352 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 ARIH1Q9Y4X5 557 aaPredicted RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 SPEF2Q9C093 1822 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 PI4KAP2A4QPH2 592 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 FAM173BQ6P4H8 233 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 TMCO3Q6UWJ1 677 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 KRBA2Q6ZNG9 492 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 FAM177A1Q8N128 213 aaPredicted RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 PI4KAP1Q8N8J0 262 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 NEK11Q8NG66 645 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 ARGLU1Q9NWB6 273 aaPredicted RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 RSPH14Q9UHP6 348 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 LCMT1Q9UIC8 334 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 RCOR1Q9UKL0 485 aa6.33□□□□□ -1.4
LINC01541-202ENST00000568095 LRRFIP2Q9Y608 721 aaKnown RBP6.33□□□□□ -1.4
LINC01541-202ENST00000568095 GOLGA6L19H0YKK7 550 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ALDH1L1O75891 902 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ETF1P62495 437 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ANKRD1Q15327 319 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ZSCAN26Q16670 478 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 FAM98CQ17RN3 349 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 CC2D1AQ6P1N0 951 aaPredicted RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 RSRC2Q7L4I2 434 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 NUTM1Q86Y26 1132 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 NECAB1Q8N987 351 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 BRMS1Q9HCU9 246 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 TRMT1Q9NXH9 659 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 MAP2K7O14733 419 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 EIF2S2P20042 333 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 TTC5Q8N0Z6 440 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 METTL22Q9BUU2 404 aaPredicted RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ZSCAN16Q9H4T2 348 aaPredicted RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 DNAI1Q9UI46 699 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 MAP3K2Q9Y2U5 619 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 PALLDQ8WX93 1383 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 NEDD4P46934 1319 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 TNRC6CQ9HCJ0 1690 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 CCP110O43303 1012 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 ATL3Q6DD88 541 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 SLC4A10Q6U841 1118 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 CWC27Q6UX04 472 aaKnown RBP6.32□□□□□ -1.4
LINC01541-202ENST00000568095 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 XAGE3Q8WTP9 111 aa6.32□□□□□ -1.4
LINC01541-202ENST00000568095 NGLY1Q96IV0 654 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms