RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 DNAJC2Q99543 621 aaKnown RBP21.93■■□□□ 1.1
COMMD4-222ENST00000568034 GPBP1L1Q9HC44 474 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-222ENST00000568034 ADARB2Q9NS39 739 aaKnown RBP21.93■■□□□ 1.1
COMMD4-222ENST00000568034 MAST2Q6P0Q8 1798 aa21.92■■□□□ 1.1
COMMD4-222ENST00000568034 GLRX3O76003 335 aaKnown RBP21.92■■□□□ 1.1
COMMD4-222ENST00000568034 LDHBP07195 334 aaKnown RBP21.92■■□□□ 1.1
COMMD4-222ENST00000568034 VEGFAP15692 232 aaPredicted RBP21.92■■□□□ 1.1
COMMD4-222ENST00000568034 SAMD7Q7Z3H4 446 aa21.92■■□□□ 1.1
COMMD4-222ENST00000568034 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
COMMD4-222ENST00000568034 PCDHAC2Q9Y5I4 1007 aa21.92■■□□□ 1.1
COMMD4-222ENST00000568034 H7C1D1 291 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 GOLIM4O00461 696 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 KIF3CO14782 793 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 ERC2O15083 957 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 MMP14P50281 582 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 HIRAP54198 1017 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-222ENST00000568034 ZBED3Q96IU2 234 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-222ENST00000568034 MYOZ2Q9NPC6 264 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 PAG1Q9NWQ8 432 aa21.91■■□□□ 1.1
COMMD4-222ENST00000568034 TBC1D10BQ4KMP7 808 aaPredicted RBP21.9■■□□□ 1.1
COMMD4-222ENST00000568034 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
COMMD4-222ENST00000568034 OGFOD1Q8N543 542 aa21.9■■□□□ 1.1
COMMD4-222ENST00000568034 NSUN4Q96CB9 384 aaKnown RBP21.9■■□□□ 1.1
COMMD4-222ENST00000568034 SERPINA10Q9UK55 444 aa21.9■■□□□ 1.1
COMMD4-222ENST00000568034 HDAC9Q9UKV0 1011 aa21.9■■□□□ 1.1
COMMD4-222ENST00000568034 MAST3O60307 1309 aa21.89■■□□□ 1.1
COMMD4-222ENST00000568034 CRKP46108 304 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
COMMD4-222ENST00000568034 MECOMQ03112 1051 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 DIXDC1Q155Q3 683 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 KIF4BQ2VIQ3 1234 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 CFAP100Q494V2 611 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 SPTY2D1Q68D10 685 aaPredicted RBP21.89■■□□□ 1.09
COMMD4-222ENST00000568034 MTMR14Q8NCE2 650 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 MRIQ9BWK5 157 aa21.89■■□□□ 1.09
COMMD4-222ENST00000568034 POTEIP0CG38 1075 aa21.88■■□□□ 1.09
COMMD4-222ENST00000568034 POTEJP0CG39 1038 aa21.88■■□□□ 1.09
COMMD4-222ENST00000568034 TTF1Q15361 905 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-222ENST00000568034 USP50Q70EL3 339 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-222ENST00000568034 RAI14Q9P0K7 980 aa21.88■■□□□ 1.09
COMMD4-222ENST00000568034 LRP2BPQ9P2M1 347 aa21.88■■□□□ 1.09
COMMD4-222ENST00000568034 GAKO14976 1311 aa21.87■■□□□ 1.09
COMMD4-222ENST00000568034 MYH2Q9UKX2 1941 aa21.87■■□□□ 1.09
COMMD4-222ENST00000568034 WNT10BO00744 389 aa21.87■■□□□ 1.09
COMMD4-222ENST00000568034 MAP4K4O95819 1239 aaPredicted RBP21.87■■□□□ 1.09
COMMD4-222ENST00000568034 RBM26Q5T8P6 1007 aaKnown RBP21.87■■□□□ 1.09
COMMD4-222ENST00000568034 DZIP1Q86YF9 867 aaKnown RBP21.87■■□□□ 1.09
COMMD4-222ENST00000568034 DAGLAQ9Y4D2 1042 aa21.87■■□□□ 1.09
COMMD4-222ENST00000568034 ASTN2O75129 1339 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-222ENST00000568034 SPDYE2BA6NHP3 402 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 IGSF3O75054 1194 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 IDH1O75874 414 aaKnown RBP21.86■■□□□ 1.09
COMMD4-222ENST00000568034 SPDYE6P0CI01 402 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 NBPF9Q3BBW0 867 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 HHIPL2Q6UWX4 724 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 TEKT1Q969V4 418 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 FAM163AQ96GL9 167 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-222ENST00000568034 PRMT6Q96LA8 375 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-222ENST00000568034 ZDHHC15Q96MV8 337 aa21.86■■□□□ 1.09
COMMD4-222ENST00000568034 CHGBP05060 677 aa21.85■■□□□ 1.09
COMMD4-222ENST00000568034 APOBEC3HQ6NTF7 200 aaKnown RBP21.85■■□□□ 1.09
COMMD4-222ENST00000568034 PNMA8AQ86V59 439 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-222ENST00000568034 KBTBD3Q8NAB2 608 aa21.85■■□□□ 1.09
COMMD4-222ENST00000568034 MYH7P12883 1935 aa21.84■■□□□ 1.09
COMMD4-222ENST00000568034 MROH7-TTC4A0A0A0MT08 1334 aa21.84■■□□□ 1.09
COMMD4-222ENST00000568034 GSPT1P15170 499 aaKnown RBP21.84■■□□□ 1.09
COMMD4-222ENST00000568034 DLGAP5Q15398 846 aa21.84■■□□□ 1.09
COMMD4-222ENST00000568034 EAPPQ56P03 285 aaPredicted RBP21.84■■□□□ 1.09
COMMD4-222ENST00000568034 ADGRA1Q86SQ6 560 aa21.84■■□□□ 1.09
COMMD4-222ENST00000568034 ECM29Q5VYK3 1845 aa21.84■■□□□ 1.09
COMMD4-222ENST00000568034 TCRBV5S4A2TA0A5A2 114 aa21.83■■□□□ 1.09
COMMD4-222ENST00000568034 PDE6AP16499 860 aa21.83■■□□□ 1.09
COMMD4-222ENST00000568034 MAP3K12Q12852 859 aa21.83■■□□□ 1.09
COMMD4-222ENST00000568034 TTC22Q5TAA0 569 aa21.83■■□□□ 1.09
COMMD4-222ENST00000568034 NAA16Q6N069 864 aaPredicted RBP21.83■■□□□ 1.09
COMMD4-222ENST00000568034 PGAP2Q9UHJ9 254 aa21.83■■□□□ 1.09
COMMD4-222ENST00000568034 ADD2P35612 726 aa21.82■■□□□ 1.08
COMMD4-222ENST00000568034 RBM5P52756 815 aaKnown RBP eCLIP21.82■■□□□ 1.08
COMMD4-222ENST00000568034 SLFNL1Q499Z3 407 aa21.82■■□□□ 1.08
COMMD4-222ENST00000568034 LDHDQ86WU2 507 aa21.82■■□□□ 1.08
COMMD4-222ENST00000568034 MAGEB6Q8N7X4 407 aa21.82■■□□□ 1.08
COMMD4-222ENST00000568034 GPR75-ASB3A0A0A6YYF3 556 aa21.81■■□□□ 1.08
COMMD4-222ENST00000568034 GSTO1P78417 241 aa21.81■■□□□ 1.08
COMMD4-222ENST00000568034 ZC3H15Q8WU90 426 aaKnown RBP21.81■■□□□ 1.08
COMMD4-222ENST00000568034 GGA3Q9NZ52 723 aa21.81■■□□□ 1.08
COMMD4-222ENST00000568034 RFX7Q2KHR2 1363 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 CYP7A1P22680 504 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 BTDP43251 543 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 SPDYE2Q495Y8 402 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 SLC9C2Q5TAH2 1124 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 TMED8Q6PL24 325 aaPredicted RBP21.8■■□□□ 1.08
COMMD4-222ENST00000568034 SLF2Q8IX21 1173 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 EVI5LQ96CN4 794 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 TDRD3Q9H7E2 651 aaKnown RBP21.8■■□□□ 1.08
COMMD4-222ENST00000568034 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
COMMD4-222ENST00000568034 CLRN2A0PK11 232 aa21.79■■□□□ 1.08
COMMD4-222ENST00000568034 LDHCP07864 332 aa21.79■■□□□ 1.08
COMMD4-222ENST00000568034 RHBDL3P58872 404 aa21.79■■□□□ 1.08
COMMD4-222ENST00000568034 ANGEL2Q5VTE6 544 aaKnown RBP21.79■■□□□ 1.08
COMMD4-222ENST00000568034 ZNF70Q9UC06 446 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms