RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 HAUS7Q99871 368 aa27.54■■■□□ 2
E4F1-208ENST00000567111 RAI14Q9P0K7 980 aa27.54■■■□□ 2
E4F1-208ENST00000567111 SERPINA10Q9UK55 444 aa27.54■■■□□ 2
E4F1-208ENST00000567111 CLEC11AQ9Y240 323 aa27.54■■■□□ 2
E4F1-208ENST00000567111 SHTN1A0MZ66 631 aa27.53■■■□□ 2
E4F1-208ENST00000567111 GLRX3O76003 335 aaKnown RBP27.53■■■□□ 2
E4F1-208ENST00000567111 CYP2E1P05181 493 aaPredicted RBP27.53■■■□□ 2
E4F1-208ENST00000567111 KIF4BQ2VIQ3 1234 aa27.53■■■□□ 2
E4F1-208ENST00000567111 DZIP1Q86YF9 867 aaKnown RBP27.53■■■□□ 2
E4F1-208ENST00000567111 TEKT1Q969V4 418 aa27.53■■■□□ 2
E4F1-208ENST00000567111 DNAJC2Q99543 621 aaKnown RBP27.53■■■□□ 2
E4F1-208ENST00000567111 STAP2Q9UGK3 403 aa27.53■■■□□ 2
E4F1-208ENST00000567111 KIF3CO14782 793 aa27.52■■■□□ 2
E4F1-208ENST00000567111 LDHCP07864 332 aa27.52■■■□□ 2
E4F1-208ENST00000567111 PRDX5P30044 214 aa27.52■■■□□ 2
E4F1-208ENST00000567111 GSTO1P78417 241 aa27.52■■■□□ 2
E4F1-208ENST00000567111 MTMR14Q8NCE2 650 aa27.52■■■□□ 2
E4F1-208ENST00000567111 OTUD7AQ8TE49 926 aaPredicted RBP27.52■■■□□ 2
E4F1-208ENST00000567111 ZNF646O15015 1829 aaPredicted RBP27.51■■□□□ 1.99
E4F1-208ENST00000567111 PDE1AP54750 535 aa27.51■■□□□ 1.99
E4F1-208ENST00000567111 GRIK5Q16478 980 aa27.51■■□□□ 1.99
E4F1-208ENST00000567111 CFAP100Q494V2 611 aa27.51■■□□□ 1.99
E4F1-208ENST00000567111 HHIPL2Q6UWX4 724 aa27.51■■□□□ 1.99
E4F1-208ENST00000567111 ZC3H15Q8WU90 426 aaKnown RBP27.51■■□□□ 1.99
E4F1-208ENST00000567111 AKAP11Q9UKA4 1901 aa27.51■■□□□ 1.99
E4F1-208ENST00000567111 CRKP46108 304 aa27.5■■□□□ 1.99
E4F1-208ENST00000567111 MAP3K12Q12852 859 aa27.5■■□□□ 1.99
E4F1-208ENST00000567111 LDHDQ86WU2 507 aa27.5■■□□□ 1.99
E4F1-208ENST00000567111 PAG1Q9NWQ8 432 aa27.5■■□□□ 1.99
E4F1-208ENST00000567111 GOLIM4O00461 696 aa27.49■■□□□ 1.99
E4F1-208ENST00000567111 MYO1BO43795 1136 aa27.49■■□□□ 1.99
E4F1-208ENST00000567111 TMED8Q6PL24 325 aaPredicted RBP27.49■■□□□ 1.99
E4F1-208ENST00000567111 TRPM4Q8TD43 1214 aa27.49■■□□□ 1.99
E4F1-208ENST00000567111 SALL3Q9BXA9 1300 aa27.48■■□□□ 1.99
E4F1-208ENST00000567111 IDH1O75874 414 aaKnown RBP27.48■■□□□ 1.99
E4F1-208ENST00000567111 TOMM70O94826 608 aa27.48■■□□□ 1.99
E4F1-208ENST00000567111 PIH1D3Q9NQM4 214 aaKnown RBP27.48■■□□□ 1.99
E4F1-208ENST00000567111 NDUFB9Q9Y6M9 179 aa27.48■■□□□ 1.99
E4F1-208ENST00000567111 AOX1Q06278 1338 aa27.47■■□□□ 1.99
E4F1-208ENST00000567111 HIRAP54198 1017 aaPredicted RBP27.47■■□□□ 1.99
E4F1-208ENST00000567111 MECOMQ03112 1051 aa27.47■■□□□ 1.99
E4F1-208ENST00000567111 TSHZ3Q63HK5 1081 aa27.47■■□□□ 1.99
E4F1-208ENST00000567111 PLEKHM2Q8IWE5 1019 aa27.47■■□□□ 1.99
E4F1-208ENST00000567111 PI4K2BQ8TCG2 481 aa27.46■■□□□ 1.99
E4F1-208ENST00000567111 DCPSQ96C86 337 aaKnown RBP27.46■■□□□ 1.99
E4F1-208ENST00000567111 FAM163AQ96GL9 167 aaPredicted RBP27.46■■□□□ 1.99
E4F1-208ENST00000567111 ZDHHC15Q96MV8 337 aa27.46■■□□□ 1.99
E4F1-208ENST00000567111 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.46■■□□□ 1.995e-8■■■■■ 44.3
E4F1-208ENST00000567111 OSBPL3Q9H4L5 887 aa27.46■■□□□ 1.99
E4F1-208ENST00000567111 ANTXR1Q9H6X2 564 aa27.46■■□□□ 1.99
E4F1-208ENST00000567111 PGAP2Q9UHJ9 254 aa27.46■■□□□ 1.99
E4F1-208ENST00000567111 SPDYE2BA6NHP3 402 aa27.45■■□□□ 1.98
E4F1-208ENST00000567111 WNT10BO00744 389 aa27.45■■□□□ 1.98
E4F1-208ENST00000567111 EGFRP00533 1210 aa27.45■■□□□ 1.98
E4F1-208ENST00000567111 SPDYE6P0CI01 402 aa27.45■■□□□ 1.98
E4F1-208ENST00000567111 NAA16Q6N069 864 aaPredicted RBP27.45■■□□□ 1.98
E4F1-208ENST00000567111 CHADLQ6NUI6 762 aa27.45■■□□□ 1.98
E4F1-208ENST00000567111 RBM46Q8TBY0 533 aaKnown RBP27.45■■□□□ 1.98
E4F1-208ENST00000567111 NSUN4Q96CB9 384 aaKnown RBP27.45■■□□□ 1.98
E4F1-208ENST00000567111 PRMT6Q96LA8 375 aaPredicted RBP27.45■■□□□ 1.98
E4F1-208ENST00000567111 DIXDC1Q155Q3 683 aa27.44■■□□□ 1.98
E4F1-208ENST00000567111 LRRFIP1Q32MZ4 808 aaKnown RBP27.44■■□□□ 1.98
E4F1-208ENST00000567111 NBPF9Q3BBW0 867 aa27.44■■□□□ 1.98
E4F1-208ENST00000567111 ZSCAN25Q6NSZ9 544 aa27.44■■□□□ 1.98
E4F1-208ENST00000567111 SMC1BQ8NDV3 1235 aa27.44■■□□□ 1.98
E4F1-208ENST00000567111 ZBED3Q96IU2 234 aaPredicted RBP27.44■■□□□ 1.98
E4F1-208ENST00000567111 NOL10Q9BSC4 688 aaKnown RBP27.44■■□□□ 1.98
E4F1-208ENST00000567111 DAGLAQ9Y4D2 1042 aa27.42■■□□□ 1.98
E4F1-208ENST00000567111 POTEIP0CG38 1075 aa27.41■■□□□ 1.98
E4F1-208ENST00000567111 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
E4F1-208ENST00000567111 PDE4AP27815 886 aa27.41■■□□□ 1.98
E4F1-208ENST00000567111 SLC9C2Q5TAH2 1124 aa27.41■■□□□ 1.98
E4F1-208ENST00000567111 EDC3Q96F86 508 aaKnown RBP27.41■■□□□ 1.98
E4F1-208ENST00000567111 TMOD2Q9NZR1 351 aa27.41■■□□□ 1.98
E4F1-208ENST00000567111 BAG3O95817 575 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 CYP7A1P22680 504 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 ANGEL2Q5VTE6 544 aaKnown RBP27.4■■□□□ 1.98
E4F1-208ENST00000567111 MAGEB6Q8N7X4 407 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 KBTBD3Q8NAB2 608 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 MROH7-TTC4A0A0A0MT08 1334 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 GAKO14976 1311 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 PITPNM2Q9BZ72 1349 aa27.4■■□□□ 1.98
E4F1-208ENST00000567111 MAP4K4O95819 1239 aaPredicted RBP27.39■■□□□ 1.98
E4F1-208ENST00000567111 FSTL1Q12841 308 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 APOBEC3HQ6NTF7 200 aaKnown RBP27.39■■□□□ 1.98
E4F1-208ENST00000567111 CDC37L1Q7L3B6 337 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 SULF1Q8IWU6 871 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 CNTROBQ8N137 903 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 EVI5LQ96CN4 794 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 TDRD3Q9H7E2 651 aaKnown RBP27.39■■□□□ 1.98
E4F1-208ENST00000567111 GGA3Q9NZ52 723 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 PCDHAC2Q9Y5I4 1007 aa27.39■■□□□ 1.98
E4F1-208ENST00000567111 GPR75-ASB3A0A0A6YYF3 556 aa27.38■■□□□ 1.97
E4F1-208ENST00000567111 MAP1SQ66K74 1059 aaPredicted RBP27.38■■□□□ 1.97
E4F1-208ENST00000567111 APOBEC3FQ8IUX4 373 aaKnown RBP27.38■■□□□ 1.97
E4F1-208ENST00000567111 USP40Q9NVE5 1235 aa27.38■■□□□ 1.97
E4F1-208ENST00000567111 ZNF70Q9UC06 446 aaPredicted RBP27.38■■□□□ 1.97
E4F1-208ENST00000567111 MYH2Q9UKX2 1941 aa27.37■■□□□ 1.97
E4F1-208ENST00000567111 TRIM6-TRIM34B2RNG4 842 aa27.37■■□□□ 1.97
E4F1-208ENST00000567111 ZFYP08048 801 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms