RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DENND2AQ9ULE3 1009 aa22.68■■□□□ 1.22
SYNGR3-204ENST00000564642 SEMA3EO15041 775 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 AOC2O75106 756 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 ADORA1P30542 326 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 HDLBPQ00341 1268 aaKnown RBP22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 TTLL12Q14166 644 aaPredicted RBP22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 CCDC102BQ68D86 513 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 XAGE2Q96GT9 111 aa22.67■■□□□ 1.22
SYNGR3-204ENST00000564642 PAPPA2Q9BXP8 1791 aa22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 SURF6O75683 361 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 ZNF157P51786 506 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 MVPQ14764 893 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 MRIQ9BWK5 157 aa22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 TDRD3Q9H7E2 651 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 WBP1LQ9NX94 342 aa22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 PPP2R3BQ9Y5P8 575 aa22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 COL1A1P02452 1464 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-204ENST00000564642 GORABQ5T7V8 394 aa22.65■■□□□ 1.22
SYNGR3-204ENST00000564642 BEGAINQ9BUH8 593 aa22.65■■□□□ 1.22
SYNGR3-204ENST00000564642 ZNF70Q9UC06 446 aaPredicted RBP22.65■■□□□ 1.22
SYNGR3-204ENST00000564642 DDX19BQ9UMR2 479 aa22.65■■□□□ 1.22
SYNGR3-204ENST00000564642 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
SYNGR3-204ENST00000564642 NOGQ13253 232 aa22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 TNFAIP1Q13829 316 aa22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 SPDYE2Q495Y8 402 aa22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 THSD7BQ9C0I4 1608 aa22.64■■□□□ 1.21
SYNGR3-204ENST00000564642 AOX1Q06278 1338 aa22.63■■□□□ 1.21
SYNGR3-204ENST00000564642 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
SYNGR3-204ENST00000564642 MOB2Q70IA6 237 aa22.63■■□□□ 1.21
SYNGR3-204ENST00000564642 ARMC9Q7Z3E5 817 aa22.63■■□□□ 1.21
SYNGR3-204ENST00000564642 UBE2Q2LH0YL09 131 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 ZBTB22O15209 634 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 FOXN1O15353 648 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 LDHBP07195 334 aaKnown RBP22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 PRKG1Q13976 671 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 SUPT20HL1Q3ZLR7 823 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 HHIPL2Q6UWX4 724 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 ZGPATQ8N5A5 531 aaKnown RBP22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 ZDHHC15Q96MV8 337 aa22.62■■□□□ 1.21
SYNGR3-204ENST00000564642 SALL1Q9NSC2 1324 aa22.61■■□□□ 1.21
SYNGR3-204ENST00000564642 TNNI2P48788 182 aa22.61■■□□□ 1.21
SYNGR3-204ENST00000564642 RASA3Q14644 834 aa22.61■■□□□ 1.21
SYNGR3-204ENST00000564642 NOP58Q9Y2X3 529 aaKnown RBP22.61■■□□□ 1.21
SYNGR3-204ENST00000564642 FAM155AB1AL88 458 aaPredicted RBP22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 TCP10L2B9ZVM9 353 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 PRDX5P30044 214 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 CTCFP49711 727 aaPredicted RBP22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 RASGRF1Q13972 1273 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 PDE3AQ14432 1141 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 GPR108Q9NPR9 543 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 TMOD2Q9NZR1 351 aa22.6■■□□□ 1.21
SYNGR3-204ENST00000564642 PPP1R12BO60237 982 aaPredicted RBP22.59■■□□□ 1.21
SYNGR3-204ENST00000564642 SLC10A3P09131 477 aa22.59■■□□□ 1.21
SYNGR3-204ENST00000564642 ANGEL1Q9UNK9 670 aaKnown RBP22.59■■□□□ 1.21
SYNGR3-204ENST00000564642 PDS5AQ29RF7 1337 aaKnown RBP22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 TNNI3KQ59H18 835 aa22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 NBPF12Q5TAG4 269 aaPredicted RBP22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 ZBTB40Q9NUA8 1239 aa22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 ABCF2Q9UG63 623 aa22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 FPGT-TNNI3KV9GXZ4 949 aa22.58■■□□□ 1.21
SYNGR3-204ENST00000564642 UQCRFS1P1P0C7P4 283 aa22.57■■□□□ 1.2
SYNGR3-204ENST00000564642 SPTY2D1Q68D10 685 aaPredicted RBP22.57■■□□□ 1.2
SYNGR3-204ENST00000564642 APOBEC3HQ6NTF7 200 aaKnown RBP22.57■■□□□ 1.2
SYNGR3-204ENST00000564642 ZIC5Q96T25 663 aa22.57■■□□□ 1.2
SYNGR3-204ENST00000564642 KIF23Q02241 960 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 DIXDC1Q155Q3 683 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 HSP90AB4PQ58FF6 505 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 DZIP1Q86YF9 867 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 RASAL3Q86YV0 1011 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 ERC1Q8IUD2 1116 aa22.56■■□□□ 1.2
SYNGR3-204ENST00000564642 MYH2Q9UKX2 1941 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 HMMRO75330 724 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 ARID4AP29374 1257 aaPredicted RBP22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 CACNB3P54284 484 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 TTC39AQ5SRH9 613 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 SLF2Q8IX21 1173 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 SPATA5Q8NB90 893 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 HMG20BQ9P0W2 317 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 FZD1Q9UP38 647 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 EXOC6BQ9Y2D4 811 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 DAGLAQ9Y4D2 1042 aa22.55■■□□□ 1.2
SYNGR3-204ENST00000564642 CA12O43570 354 aa22.54■■□□□ 1.2
SYNGR3-204ENST00000564642 LBX1P52954 281 aa22.54■■□□□ 1.2
SYNGR3-204ENST00000564642 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
SYNGR3-204ENST00000564642 DBNDD2Q9BQY9 259 aa22.54■■□□□ 1.2
SYNGR3-204ENST00000564642 TMEM39BQ9GZU3 492 aa22.54■■□□□ 1.2
SYNGR3-204ENST00000564642 HSPA8P11142 646 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-204ENST00000564642 IREB2P48200 963 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-204ENST00000564642 MAP3K11Q16584 847 aa22.53■■□□□ 1.2
SYNGR3-204ENST00000564642 LDLRAD1Q5T700 205 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms