RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 SAPCD2Q86UD0 394 aa24.98■■□□□ 1.59
CMTM3-206ENST00000563672 APOBEC3FQ8IUX4 373 aaKnown RBP24.98■■□□□ 1.59
CMTM3-206ENST00000563672 JMYQ8N9B5 988 aa24.98■■□□□ 1.59
CMTM3-206ENST00000563672 MYO1BO43795 1136 aa24.97■■□□□ 1.59
CMTM3-206ENST00000563672 ARID4AP29374 1257 aaPredicted RBP24.97■■□□□ 1.59
CMTM3-206ENST00000563672 DEFB115Q30KQ5 88 aa24.97■■□□□ 1.59
CMTM3-206ENST00000563672 MAST3O60307 1309 aa24.96■■□□□ 1.59
CMTM3-206ENST00000563672 TEKT1Q969V4 418 aa24.96■■□□□ 1.59
CMTM3-206ENST00000563672 EAF2Q96CJ1 260 aaPredicted RBP24.96■■□□□ 1.59
CMTM3-206ENST00000563672 DBNDD2Q9BQY9 259 aa24.96■■□□□ 1.59
CMTM3-206ENST00000563672 CLRN2A0PK11 232 aa24.95■■□□□ 1.58
CMTM3-206ENST00000563672 PRDX5P30044 214 aa24.95■■□□□ 1.58
CMTM3-206ENST00000563672 ZDHHC15Q96MV8 337 aa24.95■■□□□ 1.58
CMTM3-206ENST00000563672 GBA2Q9HCG7 927 aaPredicted RBP24.95■■□□□ 1.58
CMTM3-206ENST00000563672 HMG20BQ9P0W2 317 aa24.95■■□□□ 1.58
CMTM3-206ENST00000563672 LDHBP07195 334 aaKnown RBP24.94■■□□□ 1.58
CMTM3-206ENST00000563672 UQCRFS1P1P0C7P4 283 aa24.94■■□□□ 1.58
CMTM3-206ENST00000563672 SPDYE2Q495Y8 402 aa24.94■■□□□ 1.58
CMTM3-206ENST00000563672 PRAMEF18Q5VWM3 479 aa24.94■■□□□ 1.58
CMTM3-206ENST00000563672 HHIPL2Q6UWX4 724 aa24.94■■□□□ 1.58
CMTM3-206ENST00000563672 ZGPATQ8N5A5 531 aaKnown RBP24.94■■□□□ 1.58
CMTM3-206ENST00000563672 RHPN1Q8TCX5 695 aa24.94■■□□□ 1.58
CMTM3-206ENST00000563672 DBNLQ9UJU6 430 aaKnown RBP24.94■■□□□ 1.58
CMTM3-206ENST00000563672 VEGFBP49765 207 aa24.93■■□□□ 1.58
CMTM3-206ENST00000563672 C2orf69Q8N8R5 385 aa24.93■■□□□ 1.58
CMTM3-206ENST00000563672 SPATA5Q8NB90 893 aa24.93■■□□□ 1.58
CMTM3-206ENST00000563672 HHIPL1Q96JK4 782 aa24.93■■□□□ 1.58
CMTM3-206ENST00000563672 CCDC8Q9H0W5 538 aaPredicted RBP24.93■■□□□ 1.58
CMTM3-206ENST00000563672 DEFB129Q9H1M3 183 aa24.93■■□□□ 1.58
CMTM3-206ENST00000563672 TDRD3Q9H7E2 651 aaKnown RBP24.93■■□□□ 1.58
CMTM3-206ENST00000563672 ZNF70Q9UC06 446 aaPredicted RBP24.93■■□□□ 1.58
CMTM3-206ENST00000563672 RAB11FIP3O75154 756 aa24.92■■□□□ 1.58
CMTM3-206ENST00000563672 MCAMP43121 646 aa24.92■■□□□ 1.58
CMTM3-206ENST00000563672 CCDC158Q5M9N0 1113 aa24.92■■□□□ 1.58
CMTM3-206ENST00000563672 APOBEC3HQ6NTF7 200 aaKnown RBP24.92■■□□□ 1.58
CMTM3-206ENST00000563672 ZNF512BQ96KM6 892 aaPredicted RBP24.92■■□□□ 1.58
CMTM3-206ENST00000563672 TLR7Q9NYK1 1049 aaKnown RBP24.92■■□□□ 1.58
CMTM3-206ENST00000563672 PPP2R3BQ9Y5P8 575 aa24.92■■□□□ 1.58
CMTM3-206ENST00000563672 MYH13Q9UKX3 1938 aa24.91■■□□□ 1.58
CMTM3-206ENST00000563672 PI16Q6UXB8 463 aa24.91■■□□□ 1.58
CMTM3-206ENST00000563672 KIF1BPQ96EK5 621 aa24.91■■□□□ 1.58
CMTM3-206ENST00000563672 VEZTQ9HBM0 779 aa24.91■■□□□ 1.58
CMTM3-206ENST00000563672 FKBP1BP68106 108 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 DIXDC1Q155Q3 683 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 TTC39AQ5SRH9 613 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 CRBNQ96SW2 442 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 IL1RAPL2Q9NP60 686 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 ABCF2Q9UG63 623 aa24.9■■□□□ 1.58
CMTM3-206ENST00000563672 HUNKP57058 714 aa24.89■■□□□ 1.58
CMTM3-206ENST00000563672 SPTY2D1Q68D10 685 aaPredicted RBP24.89■■□□□ 1.58
CMTM3-206ENST00000563672 AACSQ86V21 672 aa24.89■■□□□ 1.58
CMTM3-206ENST00000563672 APBB1O00213 710 aa24.88■■□□□ 1.57
CMTM3-206ENST00000563672 RASA3Q14644 834 aa24.88■■□□□ 1.57
CMTM3-206ENST00000563672 CYP4F22Q6NT55 531 aa24.88■■□□□ 1.57
CMTM3-206ENST00000563672 DAGLAQ9Y4D2 1042 aa24.88■■□□□ 1.57
CMTM3-206ENST00000563672 PCDHB15Q9Y5E8 787 aa24.88■■□□□ 1.57
CMTM3-206ENST00000563672 WDR33Q9C0J8 1336 aaKnown RBP24.87■■□□□ 1.57
CMTM3-206ENST00000563672 ECM29Q5VYK3 1845 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 NF2P35240 595 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 ECE1P42892 770 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 TNFAIP1Q13829 316 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 TBC1D9Q6ZT07 1266 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 CLASRPQ8N2M8 674 aaKnown RBP24.87■■□□□ 1.57
CMTM3-206ENST00000563672 CAPNS2Q96L46 248 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 PCNTO95613 3336 aa24.87■■□□□ 1.57
CMTM3-206ENST00000563672 ERICH6Q7L0X2 663 aa24.86■■□□□ 1.57
CMTM3-206ENST00000563672 FAM163AQ96GL9 167 aaPredicted RBP24.86■■□□□ 1.57
CMTM3-206ENST00000563672 DCTPP1Q9H773 170 aa24.86■■□□□ 1.57
CMTM3-206ENST00000563672 SNRKQ9NRH2 765 aa24.86■■□□□ 1.57
CMTM3-206ENST00000563672 TCP10L2B9ZVM9 353 aa24.85■■□□□ 1.57
CMTM3-206ENST00000563672 FKBP1CQ5VVH2 108 aa24.85■■□□□ 1.57
CMTM3-206ENST00000563672 PAXIP1Q6ZW49 1069 aaPredicted RBP24.85■■□□□ 1.57
CMTM3-206ENST00000563672 DZIP1Q86YF9 867 aaKnown RBP24.85■■□□□ 1.57
CMTM3-206ENST00000563672 ZNF384Q8TF68 577 aa24.85■■□□□ 1.57
CMTM3-206ENST00000563672 GAKO14976 1311 aa24.85■■□□□ 1.57
CMTM3-206ENST00000563672 CACNB3P54284 484 aa24.84■■□□□ 1.57
CMTM3-206ENST00000563672 MECOMQ03112 1051 aa24.84■■□□□ 1.57
CMTM3-206ENST00000563672 RGMBQ6NW40 437 aa24.84■■□□□ 1.57
CMTM3-206ENST00000563672 MOB2Q70IA6 237 aa24.84■■□□□ 1.57
CMTM3-206ENST00000563672 CYP2E1P05181 493 aaPredicted RBP24.83■■□□□ 1.57
CMTM3-206ENST00000563672 ZAP70P43403 619 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 TNNI2P48788 182 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 SUPT20HL1Q3ZLR7 823 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 NBPF12Q5TAG4 269 aaPredicted RBP24.83■■□□□ 1.57
CMTM3-206ENST00000563672 CDC42EP5Q6NZY7 148 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 SLF2Q8IX21 1173 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 NSUN4Q96CB9 384 aaKnown RBP24.83■■□□□ 1.57
CMTM3-206ENST00000563672 TEPSINQ96N21 525 aa24.83■■□□□ 1.57
CMTM3-206ENST00000563672 UBE2Q2LH0YL09 131 aa24.82■■□□□ 1.56
CMTM3-206ENST00000563672 FAM83AQ86UY5 434 aa24.82■■□□□ 1.56
CMTM3-206ENST00000563672 LRRCC1Q9C099 1032 aa24.82■■□□□ 1.56
CMTM3-206ENST00000563672 TMOD2Q9NZR1 351 aa24.82■■□□□ 1.56
CMTM3-206ENST00000563672 PAPPA2Q9BXP8 1791 aa24.82■■□□□ 1.56
CMTM3-206ENST00000563672 SSC5DA1L4H1 1573 aa24.81■■□□□ 1.56
CMTM3-206ENST00000563672 IFIT2P09913 472 aaKnown RBP24.81■■□□□ 1.56
CMTM3-206ENST00000563672 GRM1Q13255 1194 aa24.81■■□□□ 1.56
CMTM3-206ENST00000563672 TMEM39BQ9GZU3 492 aa24.81■■□□□ 1.56
CMTM3-206ENST00000563672 RAI14Q9P0K7 980 aa24.81■■□□□ 1.56
CMTM3-206ENST00000563672 LRP2BPQ9P2M1 347 aa24.81■■□□□ 1.56
CMTM3-206ENST00000563672 SUPT16HQ9Y5B9 1047 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms