RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 CCDC102BQ68D86 513 aa23.54■■□□□ 1.36
TRADD-203ENST00000563348 MOB2Q70IA6 237 aa23.54■■□□□ 1.36
TRADD-203ENST00000563348 VEZTQ9HBM0 779 aa23.54■■□□□ 1.36
TRADD-203ENST00000563348 ZNF70Q9UC06 446 aaPredicted RBP23.54■■□□□ 1.36
TRADD-203ENST00000563348 PPP2R3BQ9Y5P8 575 aa23.54■■□□□ 1.36
TRADD-203ENST00000563348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.54■■□□□ 1.36
TRADD-203ENST00000563348 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
TRADD-203ENST00000563348 SPDYE2Q495Y8 402 aa23.53■■□□□ 1.36
TRADD-203ENST00000563348 XAGE2Q96GT9 111 aa23.53■■□□□ 1.36
TRADD-203ENST00000563348 TDRD3Q9H7E2 651 aaKnown RBP23.53■■□□□ 1.36
TRADD-203ENST00000563348 DENND2AQ9ULE3 1009 aa23.53■■□□□ 1.36
TRADD-203ENST00000563348 UBE2Q2LH0YL09 131 aa23.52■■□□□ 1.36
TRADD-203ENST00000563348 CTCFP49711 727 aaPredicted RBP23.52■■□□□ 1.36
TRADD-203ENST00000563348 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
TRADD-203ENST00000563348 TEKT1Q969V4 418 aa23.52■■□□□ 1.36
TRADD-203ENST00000563348 ZIC5Q96T25 663 aa23.52■■□□□ 1.36
TRADD-203ENST00000563348 MAST3O60307 1309 aa23.52■■□□□ 1.36
TRADD-203ENST00000563348 COL1A1P02452 1464 aaPredicted RBP23.51■■□□□ 1.35
TRADD-203ENST00000563348 TTLL12Q14166 644 aaPredicted RBP23.51■■□□□ 1.35
TRADD-203ENST00000563348 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
TRADD-203ENST00000563348 NEUROD6Q96NK8 337 aa23.51■■□□□ 1.35
TRADD-203ENST00000563348 BEGAINQ9BUH8 593 aa23.51■■□□□ 1.35
TRADD-203ENST00000563348 SURF6O75683 361 aaKnown RBP23.5■■□□□ 1.35
TRADD-203ENST00000563348 TNFAIP1Q13829 316 aa23.5■■□□□ 1.35
TRADD-203ENST00000563348 RASA3Q14644 834 aa23.5■■□□□ 1.35
TRADD-203ENST00000563348 MVPQ14764 893 aaKnown RBP23.5■■□□□ 1.35
TRADD-203ENST00000563348 SUPT20HL1Q3ZLR7 823 aa23.5■■□□□ 1.35
TRADD-203ENST00000563348 HHIPL2Q6UWX4 724 aa23.5■■□□□ 1.35
TRADD-203ENST00000563348 NOP58Q9Y2X3 529 aaKnown RBP23.5■■□□□ 1.35
TRADD-203ENST00000563348 SALL1Q9NSC2 1324 aa23.5■■□□□ 1.35
TRADD-203ENST00000563348 SLC10A3P09131 477 aa23.49■■□□□ 1.35
TRADD-203ENST00000563348 APOBEC3HQ6NTF7 200 aaKnown RBP23.49■■□□□ 1.35
TRADD-203ENST00000563348 ARMC9Q7Z3E5 817 aa23.49■■□□□ 1.35
TRADD-203ENST00000563348 THSD7BQ9C0I4 1608 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 PAPPA2Q9BXP8 1791 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 KIF23Q02241 960 aaPredicted RBP23.48■■□□□ 1.35
TRADD-203ENST00000563348 PRKG1Q13976 671 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 CEP85Q6P2H3 762 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 GPR108Q9NPR9 543 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 PRDM10Q9NQV6 1147 aa23.48■■□□□ 1.35
TRADD-203ENST00000563348 LDHBP07195 334 aaKnown RBP23.47■■□□□ 1.35
TRADD-203ENST00000563348 OS9Q13438 667 aaPredicted RBP23.47■■□□□ 1.35
TRADD-203ENST00000563348 RASGRF1Q13972 1273 aa23.47■■□□□ 1.35
TRADD-203ENST00000563348 LDLRAD1Q5T700 205 aa23.47■■□□□ 1.35
TRADD-203ENST00000563348 NBPF12Q5TAG4 269 aaPredicted RBP23.47■■□□□ 1.35
TRADD-203ENST00000563348 RASAL3Q86YV0 1011 aa23.47■■□□□ 1.35
TRADD-203ENST00000563348 DDX19BQ9UMR2 479 aa23.47■■□□□ 1.35
TRADD-203ENST00000563348 COG6Q9Y2V7 657 aa23.47■■□□□ 1.35
TRADD-203ENST00000563348 PDS5AQ29RF7 1337 aaKnown RBP23.47■■□□□ 1.35
TRADD-203ENST00000563348 PPP1R12BO60237 982 aaPredicted RBP23.46■■□□□ 1.35
TRADD-203ENST00000563348 HSPA8P11142 646 aaKnown RBP23.46■■□□□ 1.35
TRADD-203ENST00000563348 PRDX5P30044 214 aa23.46■■□□□ 1.35
TRADD-203ENST00000563348 LBX1P52954 281 aa23.46■■□□□ 1.35
TRADD-203ENST00000563348 GORABQ5T7V8 394 aa23.46■■□□□ 1.35
TRADD-203ENST00000563348 ZGPATQ8N5A5 531 aaKnown RBP23.46■■□□□ 1.35
TRADD-203ENST00000563348 ARAP2Q8WZ64 1704 aa23.46■■□□□ 1.35
TRADD-203ENST00000563348 ANGEL1Q9UNK9 670 aaKnown RBP23.46■■□□□ 1.35
TRADD-203ENST00000563348 TCP10L2B9ZVM9 353 aa23.45■■□□□ 1.34
TRADD-203ENST00000563348 CA12O43570 354 aa23.45■■□□□ 1.34
TRADD-203ENST00000563348 TNNI2P48788 182 aa23.45■■□□□ 1.34
TRADD-203ENST00000563348 MAP3K11Q16584 847 aa23.45■■□□□ 1.34
TRADD-203ENST00000563348 PDE3AQ14432 1141 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 FKBP1CQ5VVH2 108 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 TEPSINQ96N21 525 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 FZD1Q9UP38 647 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 ECM29Q5VYK3 1845 aa23.44■■□□□ 1.34
TRADD-203ENST00000563348 DIXDC1Q155Q3 683 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 TNNI3KQ59H18 835 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
TRADD-203ENST00000563348 CSRNP1Q96S65 589 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
TRADD-203ENST00000563348 TMOD2Q9NZR1 351 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 HMG20BQ9P0W2 317 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 DAGLAQ9Y4D2 1042 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 FPGT-TNNI3KV9GXZ4 949 aa23.43■■□□□ 1.34
TRADD-203ENST00000563348 UNCXA6NJT0 531 aa23.42■■□□□ 1.34
TRADD-203ENST00000563348 USP2O75604 605 aaPredicted RBP23.42■■□□□ 1.34
TRADD-203ENST00000563348 CACNB3P54284 484 aa23.42■■□□□ 1.34
TRADD-203ENST00000563348 SPTY2D1Q68D10 685 aaPredicted RBP23.42■■□□□ 1.34
TRADD-203ENST00000563348 RPAP2Q8IXW5 612 aaPredicted RBP23.42■■□□□ 1.34
TRADD-203ENST00000563348 REM2Q8IYK8 340 aaPredicted RBP23.42■■□□□ 1.34
TRADD-203ENST00000563348 TMEM39BQ9GZU3 492 aa23.42■■□□□ 1.34
TRADD-203ENST00000563348 ABCF2Q9UG63 623 aa23.42■■□□□ 1.34
TRADD-203ENST00000563348 SSC5DA1L4H1 1573 aa23.41■■□□□ 1.34
TRADD-203ENST00000563348 UQCRFS1P1P0C7P4 283 aa23.41■■□□□ 1.34
TRADD-203ENST00000563348 ARID4AP29374 1257 aaPredicted RBP23.41■■□□□ 1.34
TRADD-203ENST00000563348 FAM83AQ86UY5 434 aa23.41■■□□□ 1.34
TRADD-203ENST00000563348 SPATA5Q8NB90 893 aa23.41■■□□□ 1.34
TRADD-203ENST00000563348 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
TRADD-203ENST00000563348 CDAN1Q8IWY9 1227 aa23.4■■□□□ 1.34
TRADD-203ENST00000563348 SLC10A4Q96EP9 437 aa23.4■■□□□ 1.34
TRADD-203ENST00000563348 DBNDD2Q9BQY9 259 aa23.4■■□□□ 1.34
TRADD-203ENST00000563348 MYH13Q9UKX3 1938 aa23.39■■□□□ 1.34
TRADD-203ENST00000563348 IREB2P48200 963 aaKnown RBP23.39■■□□□ 1.33
TRADD-203ENST00000563348 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
TRADD-203ENST00000563348 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.33
TRADD-203ENST00000563348 FAM163AQ96GL9 167 aaPredicted RBP23.39■■□□□ 1.33
TRADD-203ENST00000563348 TSKSQ9UJT2 592 aa23.39■■□□□ 1.33
TRADD-203ENST00000563348 CCDC158Q5M9N0 1113 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms