RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PRDX5P30044 214 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 MCAMP43121 646 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 CRKP46108 304 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 DLGAP5Q15398 846 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 KRT26Q7Z3Y9 468 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 MRIQ9BWK5 157 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 DCTPP1Q9H773 170 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 SERPINA10Q9UK55 444 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 SUGT1Q9Y2Z0 365 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 PITPNM2Q9BZ72 1349 aa10.52□□□□□ -0.73
UBR1-204ENST00000563239 POLR2AP24928 1970 aaKnown RBP10.52□□□□□ -0.73
UBR1-204ENST00000563239 MYH13Q9UKX3 1938 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 APBB1O00213 710 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
UBR1-204ENST00000563239 GORABQ5T7V8 394 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 ZNF384Q8TF68 577 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
UBR1-204ENST00000563239 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 ZNF512BQ96KM6 892 aaPredicted RBP10.51□□□□□ -0.73
UBR1-204ENST00000563239 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
UBR1-204ENST00000563239 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
UBR1-204ENST00000563239 UQCRFS1P1P0C7P4 283 aa10.5□□□□□ -0.73
UBR1-204ENST00000563239 APOBEC3HQ6NTF7 200 aaKnown RBP10.5□□□□□ -0.73
UBR1-204ENST00000563239 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
UBR1-204ENST00000563239 AACSQ86V21 672 aa10.5□□□□□ -0.73
UBR1-204ENST00000563239 AKAP11Q9UKA4 1901 aa10.5□□□□□ -0.73
UBR1-204ENST00000563239 PCNTO95613 3336 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 CLRN2A0PK11 232 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 SMARCA5O60264 1052 aaPredicted RBP10.49□□□□□ -0.73
UBR1-204ENST00000563239 CELF2O95319 508 aaKnown RBP10.49□□□□□ -0.73
UBR1-204ENST00000563239 LDHBP07195 334 aaKnown RBP10.49□□□□□ -0.73
UBR1-204ENST00000563239 RBM5P52756 815 aaKnown RBP eCLIP10.49□□□□□ -0.73
UBR1-204ENST00000563239 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 TTC39AQ5SRH9 613 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 PRAMEF18Q5VWM3 479 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 HHIPL2Q6UWX4 724 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 TEKT1Q969V4 418 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 CDCA5Q96FF9 252 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 ZDHHC15Q96MV8 337 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 TDRD3Q9H7E2 651 aaKnown RBP10.49□□□□□ -0.73
UBR1-204ENST00000563239 SNRKQ9NRH2 765 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 ZNF70Q9UC06 446 aaPredicted RBP10.49□□□□□ -0.73
UBR1-204ENST00000563239 TRPM7Q96QT4 1865 aa10.49□□□□□ -0.73
UBR1-204ENST00000563239 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
UBR1-204ENST00000563239 CYP2E1P05181 493 aaPredicted RBP10.48□□□□□ -0.73
UBR1-204ENST00000563239 ZAP70P43403 619 aa10.48□□□□□ -0.73
UBR1-204ENST00000563239 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
UBR1-204ENST00000563239 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
UBR1-204ENST00000563239 LRRCC1Q9C099 1032 aa10.48□□□□□ -0.73
UBR1-204ENST00000563239 PIH1D3Q9NQM4 214 aaKnown RBP10.48□□□□□ -0.73
UBR1-204ENST00000563239 DAGLAQ9Y4D2 1042 aa10.48□□□□□ -0.73
UBR1-204ENST00000563239 ECM29Q5VYK3 1845 aa10.48□□□□□ -0.73
UBR1-204ENST00000563239 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 MECOMQ03112 1051 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 HDAC1Q13547 482 aaPredicted RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 AAMPQ13685 434 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 APOBEC3FQ8IUX4 373 aaKnown RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 ZGPATQ8N5A5 531 aaKnown RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 NSUN4Q96CB9 384 aaKnown RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 KLRG1Q96E93 195 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
UBR1-204ENST00000563239 DEFB129Q9H1M3 183 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 ZNF408Q9H9D4 720 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 ABCF2Q9UG63 623 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 NDUFB9Q9Y6M9 179 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 GAKO14976 1311 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 MAST3O60307 1309 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 CNTNAP1P78357 1384 aa10.47□□□□□ -0.73
UBR1-204ENST00000563239 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 IGHDP01880 384 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.73
UBR1-204ENST00000563239 CACNB3P54284 484 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 RASA3Q14644 834 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 SPTY2D1Q68D10 685 aaPredicted RBP10.46□□□□□ -0.73
UBR1-204ENST00000563239 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 ERICH6Q7L0X2 663 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 SAPCD2Q86UD0 394 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 TEPSINQ96N21 525 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 VEZTQ9HBM0 779 aa10.46□□□□□ -0.73
UBR1-204ENST00000563239 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
UBR1-204ENST00000563239 SSC5DA1L4H1 1573 aa10.46□□□□□ -0.74
UBR1-204ENST00000563239 TCP10L2B9ZVM9 353 aa10.45□□□□□ -0.74
UBR1-204ENST00000563239 MYO1BO43795 1136 aa10.45□□□□□ -0.74
UBR1-204ENST00000563239 MOB2Q70IA6 237 aa10.45□□□□□ -0.74
UBR1-204ENST00000563239 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
UBR1-204ENST00000563239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.45□□□□□ -0.74
UBR1-204ENST00000563239 BCL11AQ9H165 835 aa10.45□□□□□ -0.74
UBR1-204ENST00000563239 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
UBR1-204ENST00000563239 RFX7Q2KHR2 1363 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms