RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 POLR3AO14802 1390 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 KRT2P35908 639 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 CPSF2Q9P2I0 782 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 C8orf74Q6P047 294 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 ACTN2P35609 894 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 PKP1Q13835 747 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 CCDC50Q8IVM0 306 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 C14orf93Q9H972 538 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 SAMM50Q9Y512 469 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 MTX1Q13505 466 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 ESR2Q92731 530 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 TSGA10Q9BZW7 698 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 MAPK8IP1Q9UQF2 711 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 GOLGA6BA6NDN3 693 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CYP7A1P22680 504 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PSMB7Q99436 277 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 STK25O00506 426 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PCK1P35558 622 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PSMD1Q99460 953 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 SLC27A2O14975 620 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 TFCP2Q12800 502 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PHACTR3Q96KR7 559 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 VWA3AA6NCI4 1184 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 RNF113AO15541 343 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 GPT2Q8TD30 523 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PLEKHA4Q9H4M7 779 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 RAD50Q92878 1312 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 BICDL2A1A5D9 508 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CLGNO14967 610 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 SARNPP82979 210 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 PPP1R7Q15435 360 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 CYP26C1Q6V0L0 522 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 JAKMIP2Q96AA8 810 aa11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 TTF2Q9UNY4 1162 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-202ENST00000561623 SOS1Q07889 1333 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 EEF2P13639 858 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 ATP11AP98196 1134 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 DMTNQ08495 405 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 CHRNA2Q15822 529 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 FERP16591 822 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 PLS1Q14651 629 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 ZNF174Q15697 407 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 DDX12PQ92771 950 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 ZKSCAN3Q9BRR0 538 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 AMOTL2Q9Y2J4 779 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 PRPHP41219 470 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 CADPS2Q86UW7 1296 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 TMTC2Q8N394 836 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 NAPAP54920 295 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 SKIV2LQ15477 1246 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 ATP2B3Q16720 1220 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 BICD1Q96G01 975 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 TSNARE1Q96NA8 513 aa11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 MTRF1LQ9UGC7 380 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 ABT1Q9ULW3 272 aaKnown RBP11.48□□□□□ -0.57
GTF3C1-202ENST00000561623 UQCRFS1P1P0C7P4 283 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 MAP2K2P36507 400 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 STIM2Q9P246 746 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 BCS1LQ9Y276 419 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 NLRP12P59046 1061 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 RAPGEF1Q13905 1077 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 KIF22Q14807 665 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 KCNH3Q9ULD8 1083 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 PYCARDQ9ULZ3 195 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 CERS3Q8IU89 383 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 NOC4LQ9BVI4 516 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 TRIM31Q9BZY9 425 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 XPO4Q9C0E2 1151 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 ZMYM4Q5VZL5 1548 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 NAP1L3Q99457 506 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms