RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 APOBEC3FQ8IUX4 373 aaKnown RBP8.64□□□□□ -1.03
SPG11-224ENST00000561268 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
SPG11-224ENST00000561268 ARHGAP45Q92619 1136 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 COLQQ9Y215 455 aaPredicted RBP8.64□□□□□ -1.03
SPG11-224ENST00000561268 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 MGAMO43451 1857 aa8.64□□□□□ -1.03
SPG11-224ENST00000561268 AOC2O75106 756 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 KCNJ4P48050 445 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
SPG11-224ENST00000561268 MTX1Q13505 466 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 LRRC24Q50LG9 513 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 RGMBQ6NW40 437 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 OGFOD1Q8N543 542 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
SPG11-224ENST00000561268 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 SAGE1Q9NXZ1 904 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
SPG11-224ENST00000561268 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 LOC285556D6RIA3 1793 aa8.63□□□□□ -1.03
SPG11-224ENST00000561268 RFX7Q2KHR2 1363 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 AOX1Q06278 1338 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 SASH1O94885 1247 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 PDE8BO95263 885 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
SPG11-224ENST00000561268 INTS3Q68E01 1043 aaKnown RBP8.62□□□□□ -1.03
SPG11-224ENST00000561268 ATG9AQ7Z3C6 839 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 CDAN1Q8IWY9 1227 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 C2orf69Q8N8R5 385 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 API5Q9BZZ5 524 aaKnown RBP8.62□□□□□ -1.03
SPG11-224ENST00000561268 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 HDAC9Q9UKV0 1011 aa8.62□□□□□ -1.03
SPG11-224ENST00000561268 ZSWIM8A7E2V4 1837 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 MYH1P12882 1939 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 EYA2O00167 538 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 CIAO1O76071 339 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 LBX1P52954 281 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 RASEFQ8IZ41 740 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 CCDC102AQ96A19 550 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 MEIS3Q99687 375 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
SPG11-224ENST00000561268 MYH8P13535 1937 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 PDS5AQ29RF7 1337 aaKnown RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 UNCXA6NJT0 531 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 UBTFL1P0CB47 393 aaPredicted RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 TRIM27P14373 513 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 HIBADHP31937 336 aaKnown RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 GYG1P46976 350 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 PUM3Q15397 648 aaKnown RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 MFSD14BQ5SR56 506 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 LDLRAD1Q5T700 205 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 CFHR5Q9BXR6 569 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 COPRSQ9NQ92 184 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 NOB1Q9ULX3 412 aaKnown RBP8.6□□□□□ -1.03
SPG11-224ENST00000561268 SUGT1Q9Y2Z0 365 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 PCDHAC2Q9Y5I4 1007 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
SPG11-224ENST00000561268 SALL1Q9NSC2 1324 aa8.59□□□□□ -1.03
SPG11-224ENST00000561268 DLGAP5Q15398 846 aa8.59□□□□□ -1.03
SPG11-224ENST00000561268 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
SPG11-224ENST00000561268 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
SPG11-224ENST00000561268 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
SPG11-224ENST00000561268 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
SPG11-224ENST00000561268 TBC1D22AQ8WUA7 517 aa8.59□□□□□ -1.03
SPG11-224ENST00000561268 PRMT6Q96LA8 375 aaPredicted RBP8.59□□□□□ -1.03
SPG11-224ENST00000561268 COL2A1P02458 1487 aaPredicted RBP8.58□□□□□ -1.04
SPG11-224ENST00000561268 MAST3O60307 1309 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
SPG11-224ENST00000561268 GRIK5Q16478 980 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 ATF7IPQ6VMQ6 1270 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 LPIN2Q92539 896 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 FBXW7Q969H0 707 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 TEPSINQ96N21 525 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 MRIQ9BWK5 157 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 DEFB129Q9H1M3 183 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 SCAF8Q9UPN6 1271 aaKnown RBP8.58□□□□□ -1.04
SPG11-224ENST00000561268 HDAC5Q9UQL6 1122 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 LRRFIP2Q9Y608 721 aaKnown RBP8.58□□□□□ -1.04
SPG11-224ENST00000561268 HTTP42858 3142 aa8.58□□□□□ -1.04
SPG11-224ENST00000561268 PLIN1O60240 522 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 GNAI3P08754 354 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 IFIT1P09914 478 aaKnown RBP8.57□□□□□ -1.04
SPG11-224ENST00000561268 NF2P35240 595 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 IL15P40933 162 aaPredicted RBP8.57□□□□□ -1.04
SPG11-224ENST00000561268 KIF23Q02241 960 aaPredicted RBP8.57□□□□□ -1.04
SPG11-224ENST00000561268 TNFAIP1Q13829 316 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 FKBP1CQ5VVH2 108 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 MOB2Q70IA6 237 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 ZDHHC15Q96MV8 337 aa8.57□□□□□ -1.04
SPG11-224ENST00000561268 CSRNP1Q96S65 589 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms