RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 CEP126Q9P2H0 1117 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 SWAP70Q9UH65 585 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 CCDC171Q6TFL3 1326 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 CANXP27824 592 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 IARSP41252 1262 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 ILDR2Q71H61 639 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 GTF3C2Q8WUA4 911 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 RPGRQ92834 1020 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 COL11A1P12107 1806 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 MROH7-TTC4A0A0A0MT08 1334 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 LMNB1P20700 586 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 HOXA7P31268 230 aaPredicted RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 RUFY2Q8WXA3 655 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 KCNN1Q92952 543 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 DHX36Q9H2U1 1008 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 SRGAP3O43295 1099 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 HOXC6P09630 235 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 GPSM2P81274 684 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 ATP2B3Q16720 1220 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 C12orf42Q96LP6 360 aa6.55□□□□□ -1.36
ZEB1-219ENST00000560721 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
ZEB1-219ENST00000560721 LCTP09848 1927 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 FDX1P10109 184 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MCM2P49736 904 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CNTROBQ8N137 903 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 APPBP2Q92624 585 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 DBNLQ9UJU6 430 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 TNNQ9UQP3 1299 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 hCG_1984214I3L0E3 225 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 EIF2S2P20042 333 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 GABPAQ06546 454 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 FSTL1Q12841 308 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CCDC158Q5M9N0 1113 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CLEC17AQ6ZS10 378 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 ZNF713Q8N859 430 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MKL1Q969V6 931 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 NFKBIEO00221 500 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CDC45O75419 566 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MYL6BP14649 208 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 ORC2Q13416 577 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CAVIN4Q5BKX8 364 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 TATDN1Q6P1N9 297 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 RSBN1LQ6PCB5 846 aaPredicted RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 C3orf67Q6ZVT6 689 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MPNDQ8N594 471 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MAP4K1Q92918 833 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 RIOK1Q9BRS2 568 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 CD209Q9NNX6 404 aa6.54□□□□□ -1.36
ZEB1-219ENST00000560721 MAP3K20Q9NYL2 800 aaKnown RBP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
ZEB1-219ENST00000560721 NKX3-2P78367 333 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 KRT32Q14532 448 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 EAF2Q96CJ1 260 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 XAGE2Q96GT9 111 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 OSBPL5Q9H0X9 879 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 ZBTB3Q9H5J0 574 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 UPF2Q9HAU5 1272 aaKnown RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 A0A1B0GUL7 405 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 F6X3S4 739 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 SGSM2O43147 1006 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 SPDYE2Q495Y8 402 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 SH3D19Q5HYK7 790 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 APOBEC3FQ8IUX4 373 aaKnown RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 ARPP21Q9UBL0 812 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 HERC5Q9UII4 1024 aaKnown RBP6.53□□□□□ -1.36
ZEB1-219ENST00000560721 MYH6P13533 1939 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 STK36Q9NRP7 1315 aa6.53□□□□□ -1.36
ZEB1-219ENST00000560721 RNF113AO15541 343 aaKnown RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 HIBADHP31937 336 aaKnown RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 SPATA5Q8NB90 893 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 TTC14Q96N46 770 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 TBC1D2BQ9UPU7 963 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 U3KPZ7 1027 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 USP17L3A6NCW0 530 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 USP17L4A6NCW7 530 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 IGHA2P01877 340 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 PAXIP1Q6ZW49 1069 aaPredicted RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 USP17L1Q7RTZ2 530 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 NSUN4Q96CB9 384 aaKnown RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 POLLQ9UGP5 575 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 FRMPD4Q14CM0 1322 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 PASKQ96RG2 1323 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 ZBTB7CA1YPR0 619 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 IRF6O14896 467 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 ANKRD23Q86SG2 305 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 CELF1Q92879 486 aaKnown RBP6.52□□□□□ -1.37
ZEB1-219ENST00000560721 CTNNA3Q9UI47 895 aa6.52□□□□□ -1.37
ZEB1-219ENST00000560721 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms