RNA–Protein interactions for RNA: ENST00000559880.5

SLTM-220, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-220ENST00000559880 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
SLTM-220ENST00000559880 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
SLTM-220ENST00000559880 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
SLTM-220ENST00000559880 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
SLTM-220ENST00000559880 ZNF609O15014 1411 aa13.13□□□□□ -0.31
SLTM-220ENST00000559880 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
SLTM-220ENST00000559880 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
SLTM-220ENST00000559880 A0A1B0GUL7 405 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
SLTM-220ENST00000559880 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 PHKA1P46020 1223 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
SLTM-220ENST00000559880 FMR1Q06787 632 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■□□□□ 9
SLTM-220ENST00000559880 GRIK5Q16478 980 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
SLTM-220ENST00000559880 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
SLTM-220ENST00000559880 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 FRAT2O75474 233 aaPredicted RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 HTRA3P83110 453 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 CHMP4BQ9H444 224 aaKnown RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
SLTM-220ENST00000559880 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 CEP350Q5VT06 3117 aa13.11□□□□□ -0.31
SLTM-220ENST00000559880 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 APBB1O00213 710 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
SLTM-220ENST00000559880 HSPA6P17066 643 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
SLTM-220ENST00000559880 TRAF5O00463 557 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 SCARF1Q14162 830 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
SLTM-220ENST00000559880 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
SLTM-220ENST00000559880 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
SLTM-220ENST00000559880 HMMRO75330 724 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
SLTM-220ENST00000559880 OGFOD1Q8N543 542 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
SLTM-220ENST00000559880 BCL11AQ9H165 835 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 IL1RAPL2Q9NP60 686 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
SLTM-220ENST00000559880 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 AOX1Q06278 1338 aa13.08□□□□□ -0.32
SLTM-220ENST00000559880 STK25O00506 426 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 WNT10BO00744 389 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 APLP1P51693 650 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 PI16Q6UXB8 463 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
SLTM-220ENST00000559880 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
SLTM-220ENST00000559880 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
SLTM-220ENST00000559880 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
SLTM-220ENST00000559880 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
SLTM-220ENST00000559880 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
SLTM-220ENST00000559880 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
SLTM-220ENST00000559880 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
SLTM-220ENST00000559880 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
SLTM-220ENST00000559880 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
SLTM-220ENST00000559880 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
SLTM-220ENST00000559880 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
SLTM-220ENST00000559880 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
SLTM-220ENST00000559880 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
SLTM-220ENST00000559880 PRDX5P30044 214 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 DLGAP5Q15398 846 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 KRT26Q7Z3Y9 468 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 DCPSQ96C86 337 aaKnown RBP13.05□□□□□ -0.32
SLTM-220ENST00000559880 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
SLTM-220ENST00000559880 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
SLTM-220ENST00000559880 ARID4AP29374 1257 aaPredicted RBP13.04□□□□□ -0.32
SLTM-220ENST00000559880 MCAMP43121 646 aa13.04□□□□□ -0.32
SLTM-220ENST00000559880 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
SLTM-220ENST00000559880 HSP90AB4PQ58FF6 505 aa13.04□□□□□ -0.32
SLTM-220ENST00000559880 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
SLTM-220ENST00000559880 AACSQ86V21 672 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms