RNA–Protein interactions for RNA: ENST00000559880.5

SLTM-220, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-220ENST00000559880 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
SLTM-220ENST00000559880 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
SLTM-220ENST00000559880 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
SLTM-220ENST00000559880 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
SLTM-220ENST00000559880 PHF23Q9BUL5 403 aaPredicted RBP23.54■■□□□ 1.36
SLTM-220ENST00000559880 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
SLTM-220ENST00000559880 ABCC9O60706 1549 aa22.36■■□□□ 1.17
SLTM-220ENST00000559880 FOXD1Q16676 465 aa22.09■■□□□ 1.13
SLTM-220ENST00000559880 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
SLTM-220ENST00000559880 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
SLTM-220ENST00000559880 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
SLTM-220ENST00000559880 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
SLTM-220ENST00000559880 NACADO15069 1562 aa21.42■■□□□ 1.02
SLTM-220ENST00000559880 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
SLTM-220ENST00000559880 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
SLTM-220ENST00000559880 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
SLTM-220ENST00000559880 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
SLTM-220ENST00000559880 SCRIBQ14160 1630 aa20.89■□□□□ 0.94
SLTM-220ENST00000559880 ADRA2BP18089 450 aa20.89■□□□□ 0.93
SLTM-220ENST00000559880 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
SLTM-220ENST00000559880 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
SLTM-220ENST00000559880 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
SLTM-220ENST00000559880 MSH5O43196 834 aa20.66■□□□□ 0.9
SLTM-220ENST00000559880 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
SLTM-220ENST00000559880 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
SLTM-220ENST00000559880 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
SLTM-220ENST00000559880 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
SLTM-220ENST00000559880 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
SLTM-220ENST00000559880 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
SLTM-220ENST00000559880 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
SLTM-220ENST00000559880 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
SLTM-220ENST00000559880 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
SLTM-220ENST00000559880 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
SLTM-220ENST00000559880 SMARCA2P51531 1590 aa19.77■□□□□ 0.76
SLTM-220ENST00000559880 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
SLTM-220ENST00000559880 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
SLTM-220ENST00000559880 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
SLTM-220ENST00000559880 WIZO95785 1651 aa19.65■□□□□ 0.74
SLTM-220ENST00000559880 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
SLTM-220ENST00000559880 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
SLTM-220ENST00000559880 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
SLTM-220ENST00000559880 NESP48681 1621 aa19.38■□□□□ 0.69
SLTM-220ENST00000559880 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
SLTM-220ENST00000559880 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
SLTM-220ENST00000559880 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
SLTM-220ENST00000559880 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
SLTM-220ENST00000559880 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
SLTM-220ENST00000559880 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
SLTM-220ENST00000559880 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
SLTM-220ENST00000559880 CFTRP13569 1480 aa19.12■□□□□ 0.65
SLTM-220ENST00000559880 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
SLTM-220ENST00000559880 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
SLTM-220ENST00000559880 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
SLTM-220ENST00000559880 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
SLTM-220ENST00000559880 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
SLTM-220ENST00000559880 CUX2O14529 1486 aa18.97■□□□□ 0.63
SLTM-220ENST00000559880 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
SLTM-220ENST00000559880 PRDM2Q13029 1718 aa18.96■□□□□ 0.63
SLTM-220ENST00000559880 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
SLTM-220ENST00000559880 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
SLTM-220ENST00000559880 WDR62O43379 1518 aa18.87■□□□□ 0.61
SLTM-220ENST00000559880 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
SLTM-220ENST00000559880 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
SLTM-220ENST00000559880 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
SLTM-220ENST00000559880 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
SLTM-220ENST00000559880 CUX1P39880 1505 aa18.62■□□□□ 0.57
SLTM-220ENST00000559880 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
SLTM-220ENST00000559880 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
SLTM-220ENST00000559880 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
SLTM-220ENST00000559880 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
SLTM-220ENST00000559880 FGD5Q6ZNL6 1462 aa18.54■□□□□ 0.56
SLTM-220ENST00000559880 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
SLTM-220ENST00000559880 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
SLTM-220ENST00000559880 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
SLTM-220ENST00000559880 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
SLTM-220ENST00000559880 SOGA1O94964 1423 aa18.49■□□□□ 0.55
SLTM-220ENST00000559880 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
SLTM-220ENST00000559880 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.543e-11■■■□□ 15.7
SLTM-220ENST00000559880 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
SLTM-220ENST00000559880 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
SLTM-220ENST00000559880 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
SLTM-220ENST00000559880 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
SLTM-220ENST00000559880 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
SLTM-220ENST00000559880 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
SLTM-220ENST00000559880 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
SLTM-220ENST00000559880 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
SLTM-220ENST00000559880 DCAF8L1A6NGE4 600 aa18.3■□□□□ 0.52
SLTM-220ENST00000559880 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
SLTM-220ENST00000559880 GAPVD1Q14C86 1478 aa18.28■□□□□ 0.52
SLTM-220ENST00000559880 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
SLTM-220ENST00000559880 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
SLTM-220ENST00000559880 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
SLTM-220ENST00000559880 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
SLTM-220ENST00000559880 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
SLTM-220ENST00000559880 CHD1O14646 1710 aa18.21■□□□□ 0.51
SLTM-220ENST00000559880 FBLN2P98095 1184 aa18.21■□□□□ 0.51
SLTM-220ENST00000559880 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
SLTM-220ENST00000559880 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
SLTM-220ENST00000559880 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
SLTM-220ENST00000559880 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms