RNA–Protein interactions for RNA: ENST00000559847.6

RFX7-202, Transcript of regulatory factor X7, humanhuman

TSL 1 (best)

Gene RFX7, Length 4,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7-202ENST00000559847 FANCLQ9NW38 375 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 MRPS23Q9Y3D9 190 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 MSH6P52701 1360 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 PRPF3O43395 683 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 BAG4O95429 457 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 CDC27P30260 824 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 MAP2K2P36507 400 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 GJA8P48165 433 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 USP11P51784 963 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 HNRNPH2P55795 449 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 SFSWAPQ12872 951 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 SYCP1Q15431 976 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 NFE2Q16621 373 aaPredicted RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 PARP10Q53GL7 1025 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 ZNF772Q68DY9 489 aaPredicted RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 NAIF1Q69YI7 327 aaPredicted RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 PDXDC1Q6P996 788 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 TRIM42Q8IWZ5 723 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 NELL2Q99435 816 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 ZMAT5Q9UDW3 170 aaKnown RBP4.9□□□□□ -1.63
RFX7-202ENST00000559847 HDAC9Q9UKV0 1011 aa4.9□□□□□ -1.63
RFX7-202ENST00000559847 MOXD2PA6NHM9 499 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 PER1O15534 1290 aaPredicted RBP4.89□□□□□ -1.63
RFX7-202ENST00000559847 E2F6O75461 281 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 RASA1P20936 1047 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 PRPHP41219 470 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CCDC173Q0VFZ6 552 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 KRT72Q14CN4 511 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 COBLL1Q53SF7 1204 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 RNF34Q969K3 372 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 MAP3K14Q99558 947 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 GRPEL1Q9HAV7 217 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 SENP2Q9HC62 589 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 MAPKBP1O60336 1514 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.89□□□□□ -1.63
RFX7-202ENST00000559847 A0A1B0GUL7 405 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 PIP5K1CO60331 668 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 NLRP6P59044 892 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CTDSPL2Q05D32 466 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 PRPF4BQ13523 1007 aaKnown RBP4.89□□□□□ -1.63
RFX7-202ENST00000559847 LRRC49Q8IUZ0 686 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 SLC35B4Q969S0 331 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CD248Q9HCU0 757 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 DDX41Q9UJV9 622 aaKnown RBP4.89□□□□□ -1.63
RFX7-202ENST00000559847 INPP5FQ9Y2H2 1132 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 TNRQ92752 1358 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 NPC1L1Q9UHC9 1359 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 DIP2BQ9P265 1576 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CCDC18Q5T9S5 1454 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CD44P16070 742 aaKnown RBP4.89□□□□□ -1.63
RFX7-202ENST00000559847 ARID5AQ03989 594 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 PLEKHG4Q58EX7 1191 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 AGAP9Q5VTM2 703 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 CDHR1Q96JP9 859 aa4.89□□□□□ -1.63
RFX7-202ENST00000559847 NAP1L4Q99733 375 aaKnown RBP4.89□□□□□ -1.63
RFX7-202ENST00000559847 RUSC2Q8N2Y8 1516 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 CCDC85CA6NKD9 419 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 TMCO5BA8MYB1 307 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SLC26A4O43511 780 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 TSPAN6O43657 245 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 RTN2O75298 545 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 MYL1P05976 194 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 HOXC13P31276 330 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 NFX1Q12986 1120 aaKnown RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 RELL1Q8IUW5 271 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SAMD14Q8IZD0 417 aaPredicted RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 GOLGA6L1Q8N7Z2 621 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 DNAJC25Q9H1X3 360 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SEPT3Q9UH03 358 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L15C9J2P7 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L10C9JJH3 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L13C9JLJ4 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L12C9JPN9 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L11C9JVI0 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L21D6R901 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L18D6R9N7 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L22D6RA61 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L17D6RBQ6 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L19D6RCP7 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L20D6RJB6 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SNUPNO95149 360 aaKnown RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 SCGB1D2O95969 90 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 MSL3P1P0C860 447 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 RBP3P10745 1247 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 MYCLP1P12525 358 aaPredicted RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 CYP11B2P19099 503 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 USP17L24Q0WX57 530 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 EIF4A2Q14240 407 aaKnown RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 ESCO1Q5FWF5 840 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SAPCD2Q86UD0 394 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 NDUFAF2Q8N183 169 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 ANKRD20A12PQ8NF67 263 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SPIRE2Q8WWL2 714 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 SYMPKQ92797 1274 aaKnown RBP4.88□□□□□ -1.63
RFX7-202ENST00000559847 ERP27Q96DN0 273 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 CRACR2AQ9BSW2 395 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 VPS33BQ9H267 617 aa4.88□□□□□ -1.63
RFX7-202ENST00000559847 GPHNQ9NQX3 736 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms