RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 STAP2Q9UGK3 403 aa26.43■■□□□ 1.82
SNX1-206ENST00000559389 NDUFB9Q9Y6M9 179 aa26.43■■□□□ 1.82
SNX1-206ENST00000559389 SPTY2D1Q68D10 685 aaPredicted RBP26.42■■□□□ 1.82
SNX1-206ENST00000559389 TBC1D9Q6ZT07 1266 aa26.42■■□□□ 1.82
SNX1-206ENST00000559389 USP50Q70EL3 339 aaPredicted RBP26.42■■□□□ 1.82
SNX1-206ENST00000559389 SAMD7Q7Z3H4 446 aa26.42■■□□□ 1.82
SNX1-206ENST00000559389 PIH1D3Q9NQM4 214 aaKnown RBP26.42■■□□□ 1.82
SNX1-206ENST00000559389 MYO5AQ9Y4I1 1855 aaKnown RBP26.42■■□□□ 1.82
SNX1-206ENST00000559389 AOX1Q06278 1338 aa26.41■■□□□ 1.82
SNX1-206ENST00000559389 PDE1AP54750 535 aa26.41■■□□□ 1.82
SNX1-206ENST00000559389 TBC1D10BQ4KMP7 808 aaPredicted RBP26.41■■□□□ 1.82
SNX1-206ENST00000559389 PNMA8AQ86V59 439 aaPredicted RBP26.41■■□□□ 1.82
SNX1-206ENST00000559389 DNAJC2Q99543 621 aaKnown RBP26.41■■□□□ 1.82
SNX1-206ENST00000559389 SERPINA10Q9UK55 444 aa26.41■■□□□ 1.82
SNX1-206ENST00000559389 ECM29Q5VYK3 1845 aa26.4■■□□□ 1.82
SNX1-206ENST00000559389 ERC2O15083 957 aa26.4■■□□□ 1.82
SNX1-206ENST00000559389 GLRX3O76003 335 aaKnown RBP26.4■■□□□ 1.82
SNX1-206ENST00000559389 PDE4AP27815 886 aa26.4■■□□□ 1.82
SNX1-206ENST00000559389 HDLBPQ00341 1268 aaKnown RBP26.4■■□□□ 1.82
SNX1-206ENST00000559389 ERICH6Q7L0X2 663 aa26.4■■□□□ 1.82
SNX1-206ENST00000559389 ANTXR1Q9H6X2 564 aa26.4■■□□□ 1.82
SNX1-206ENST00000559389 HIRAP54198 1017 aaPredicted RBP26.39■■□□□ 1.82
SNX1-206ENST00000559389 DZIP1Q86YF9 867 aaKnown RBP26.39■■□□□ 1.82
SNX1-206ENST00000559389 PLEKHM2Q8IWE5 1019 aa26.39■■□□□ 1.82
SNX1-206ENST00000559389 MTMR14Q8NCE2 650 aa26.39■■□□□ 1.82
SNX1-206ENST00000559389 ZBED3Q96IU2 234 aaPredicted RBP26.39■■□□□ 1.82
SNX1-206ENST00000559389 PAG1Q9NWQ8 432 aa26.39■■□□□ 1.82
SNX1-206ENST00000559389 GOLIM4O00461 696 aa26.38■■□□□ 1.81
SNX1-206ENST00000559389 IGSF3O75054 1194 aa26.38■■□□□ 1.81
SNX1-206ENST00000559389 CRKP46108 304 aa26.38■■□□□ 1.81
SNX1-206ENST00000559389 TTF1Q15361 905 aaPredicted RBP26.38■■□□□ 1.81
SNX1-206ENST00000559389 CFAP100Q494V2 611 aa26.38■■□□□ 1.81
SNX1-206ENST00000559389 EAPPQ56P03 285 aaPredicted RBP26.38■■□□□ 1.81
SNX1-206ENST00000559389 EDC3Q96F86 508 aaKnown RBP26.38■■□□□ 1.81
SNX1-206ENST00000559389 LRP2BPQ9P2M1 347 aa26.38■■□□□ 1.81
SNX1-206ENST00000559389 POTEIP0CG38 1075 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 POTEJP0CG39 1038 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 MECOMQ03112 1051 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 DIXDC1Q155Q3 683 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 RBM26Q5T8P6 1007 aaKnown RBP26.37■■□□□ 1.81
SNX1-206ENST00000559389 ZNF384Q8TF68 577 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 TEKT1Q969V4 418 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 MRIQ9BWK5 157 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 OSBPL3Q9H4L5 887 aa26.37■■□□□ 1.81
SNX1-206ENST00000559389 MYH2Q9UKX2 1941 aa26.36■■□□□ 1.81
SNX1-206ENST00000559389 DLGAP5Q15398 846 aa26.36■■□□□ 1.81
SNX1-206ENST00000559389 LDHDQ86WU2 507 aa26.36■■□□□ 1.81
SNX1-206ENST00000559389 NSUN4Q96CB9 384 aaKnown RBP26.36■■□□□ 1.81
SNX1-206ENST00000559389 RAI14Q9P0K7 980 aa26.36■■□□□ 1.81
SNX1-206ENST00000559389 PCDHAC2Q9Y5I4 1007 aa26.36■■□□□ 1.81
SNX1-206ENST00000559389 SPDYE2BA6NHP3 402 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 WNT10BO00744 389 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 SPDYE6P0CI01 402 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 HHIPL2Q6UWX4 724 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 ZDHHC15Q96MV8 337 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 GAKO14976 1311 aa26.35■■□□□ 1.81
SNX1-206ENST00000559389 MYH7P12883 1935 aa26.34■■□□□ 1.81
SNX1-206ENST00000559389 IDH1O75874 414 aaKnown RBP26.34■■□□□ 1.81
SNX1-206ENST00000559389 DAGLAQ9Y4D2 1042 aa26.34■■□□□ 1.81
SNX1-206ENST00000559389 MROH7-TTC4A0A0A0MT08 1334 aa26.34■■□□□ 1.81
SNX1-206ENST00000559389 RBM5P52756 815 aaKnown RBP eCLIP26.33■■□□□ 1.81
SNX1-206ENST00000559389 NBPF9Q3BBW0 867 aa26.33■■□□□ 1.81
SNX1-206ENST00000559389 ZC3H15Q8WU90 426 aaKnown RBP26.33■■□□□ 1.81
SNX1-206ENST00000559389 ASTN2O75129 1339 aaPredicted RBP26.33■■□□□ 1.81
SNX1-206ENST00000559389 GSTO1P78417 241 aa26.32■■□□□ 1.8
SNX1-206ENST00000559389 MAP3K12Q12852 859 aa26.32■■□□□ 1.8
SNX1-206ENST00000559389 SLF2Q8IX21 1173 aa26.32■■□□□ 1.8
SNX1-206ENST00000559389 FAM163AQ96GL9 167 aaPredicted RBP26.32■■□□□ 1.8
SNX1-206ENST00000559389 GGA3Q9NZ52 723 aa26.32■■□□□ 1.8
SNX1-206ENST00000559389 PGAP2Q9UHJ9 254 aa26.32■■□□□ 1.8
SNX1-206ENST00000559389 NAA16Q6N069 864 aaPredicted RBP26.31■■□□□ 1.8
SNX1-206ENST00000559389 PRMT6Q96LA8 375 aaPredicted RBP26.31■■□□□ 1.8
SNX1-206ENST00000559389 TOMM70O94826 608 aa26.3■■□□□ 1.8
SNX1-206ENST00000559389 APOBEC3HQ6NTF7 200 aaKnown RBP26.3■■□□□ 1.8
SNX1-206ENST00000559389 TMED8Q6PL24 325 aaPredicted RBP26.3■■□□□ 1.8
SNX1-206ENST00000559389 KBTBD3Q8NAB2 608 aa26.3■■□□□ 1.8
SNX1-206ENST00000559389 MAP4K4O95819 1239 aaPredicted RBP26.29■■□□□ 1.8
SNX1-206ENST00000559389 MAGEB6Q8N7X4 407 aa26.29■■□□□ 1.8
SNX1-206ENST00000559389 RBM46Q8TBY0 533 aaKnown RBP26.29■■□□□ 1.8
SNX1-206ENST00000559389 CLEC11AQ9Y240 323 aa26.29■■□□□ 1.8
SNX1-206ENST00000559389 PITPNM2Q9BZ72 1349 aa26.29■■□□□ 1.8
SNX1-206ENST00000559389 LDHCP07864 332 aa26.28■■□□□ 1.8
SNX1-206ENST00000559389 PDE6AP16499 860 aa26.28■■□□□ 1.8
SNX1-206ENST00000559389 SPDYE2Q495Y8 402 aa26.28■■□□□ 1.8
SNX1-206ENST00000559389 ANGEL2Q5VTE6 544 aaKnown RBP26.28■■□□□ 1.8
SNX1-206ENST00000559389 CHADLQ6NUI6 762 aa26.28■■□□□ 1.8
SNX1-206ENST00000559389 ADGRA1Q86SQ6 560 aa26.28■■□□□ 1.8
SNX1-206ENST00000559389 MYO1BO43795 1136 aa26.27■■□□□ 1.8
SNX1-206ENST00000559389 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.27■■□□□ 1.82e-6■■■□□ 14.6
SNX1-206ENST00000559389 TDRD3Q9H7E2 651 aaKnown RBP26.27■■□□□ 1.8
SNX1-206ENST00000559389 RFX7Q2KHR2 1363 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 GPR75-ASB3A0A0A6YYF3 556 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 CYP7A1P22680 504 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 ADD2P35612 726 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 BTDP43251 543 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 SLC9C2Q5TAH2 1124 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 MAP1SQ66K74 1059 aaPredicted RBP26.26■■□□□ 1.79
SNX1-206ENST00000559389 SKAP1Q86WV1 359 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 SMC1BQ8NDV3 1235 aa26.26■■□□□ 1.79
SNX1-206ENST00000559389 TCRBV5S4A2TA0A5A2 114 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms