RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 CNOT7Q9UIV1 285 aaKnown RBP15.13■□□□□ 0.01
GABPB1-208ENST00000558970 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
GABPB1-208ENST00000558970 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
GABPB1-208ENST00000558970 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 HAUS7Q99871 368 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 PCDHAC2Q9Y5I4 1007 aa15.12■□□□□ 0.01
GABPB1-208ENST00000558970 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 EGFRP00533 1210 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 USP17L8P0C7I0 530 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 RPS12P25398 132 aaKnown RBP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 DIXDC1Q155Q3 683 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 GMLQ99445 158 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
GABPB1-208ENST00000558970 PDS5AQ29RF7 1337 aaKnown RBP15.11■□□□□ 0.01
GABPB1-208ENST00000558970 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 EAPPQ56P03 285 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-208ENST00000558970 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 JMYQ8N9B5 988 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 RILPL2Q969X0 211 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 HDAC9Q9UKV0 1011 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
GABPB1-208ENST00000558970 POLR2AP24928 1970 aaKnown RBP15.09■□□□□ 0.01
GABPB1-208ENST00000558970 POTECB2RU33 542 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 H7C1D1 291 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 CHGBP05060 677 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
GABPB1-208ENST00000558970 MECOMQ03112 1051 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-208ENST00000558970 TRPM4Q8TD43 1214 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-208ENST00000558970 FSD1Q9BTV5 496 aa15.09■□□□□ 0.01
GABPB1-208ENST00000558970 EPHX2P34913 555 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 TTF1Q15361 905 aaPredicted RBP15.08■□□□□ 0
GABPB1-208ENST00000558970 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 CFAP100Q494V2 611 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 TTC22Q5TAA0 569 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 DPF2Q92785 391 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 KLRG1Q96E93 195 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 MYOZ2Q9NPC6 264 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 AOX1Q06278 1338 aa15.08■□□□□ 0
GABPB1-208ENST00000558970 IQCA1LA6NCM1 817 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 GSPT1P15170 499 aaKnown RBP15.07■□□□□ 0
GABPB1-208ENST00000558970 CRKP46108 304 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 MAP3K12Q12852 859 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
GABPB1-208ENST00000558970 ZNF384Q8TF68 577 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 TEKT1Q969V4 418 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 NSUN4Q96CB9 384 aaKnown RBP15.07■□□□□ 0
GABPB1-208ENST00000558970 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 SCAF8Q9UPN6 1271 aaKnown RBP15.07■□□□□ 0
GABPB1-208ENST00000558970 MAST3O60307 1309 aa15.07■□□□□ 0
GABPB1-208ENST00000558970 ASTN2O75129 1339 aaPredicted RBP15.07■□□□□ 0
GABPB1-208ENST00000558970 POTEIP0CG38 1075 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 POTEJP0CG39 1038 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
GABPB1-208ENST00000558970 DLGAP5Q15398 846 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 SLC9C2Q5TAH2 1124 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 ADGRA1Q86SQ6 560 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 TAF1DQ9H5J8 278 aaPredicted RBP15.06■□□□□ 0
GABPB1-208ENST00000558970 ADARB2Q9NS39 739 aaKnown RBP15.06■□□□□ 0
GABPB1-208ENST00000558970 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 DAGLAQ9Y4D2 1042 aa15.06■□□□□ 0
GABPB1-208ENST00000558970 CLRN2A0PK11 232 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 CYP7A1P22680 504 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 ZNF280AP59817 542 aaPredicted RBP15.05■□□□□ -0
GABPB1-208ENST00000558970 CNTROBQ8N137 903 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 KBTBD3Q8NAB2 608 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 MIGA1Q8NAN2 632 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.05■□□□□ -0
GABPB1-208ENST00000558970 SUGT1Q9Y2Z0 365 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 MROH7-TTC4A0A0A0MT08 1334 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 ZNF532Q9HCE3 1301 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 FOCADQ5VW36 1801 aa15.05■□□□□ -0
GABPB1-208ENST00000558970 NAV1Q8NEY1 1877 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 ZBTB22O15209 634 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 PDE6AP16499 860 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
GABPB1-208ENST00000558970 CACNB3P54284 484 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 GSTO1P78417 241 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 EVI5LQ96CN4 794 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 PRMT6Q96LA8 375 aaPredicted RBP15.04■□□□□ -0
GABPB1-208ENST00000558970 TDRD3Q9H7E2 651 aaKnown RBP15.04■□□□□ -0
GABPB1-208ENST00000558970 VEZTQ9HBM0 779 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -03e-7■■■□□ 15.6
GABPB1-208ENST00000558970 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
GABPB1-208ENST00000558970 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
GABPB1-208ENST00000558970 WNT10BO00744 389 aa15.03■□□□□ -0
GABPB1-208ENST00000558970 SPDYE6P0CI01 402 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms