RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 GPR108Q9NPR9 543 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 TMOD2Q9NZR1 351 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 MKRN1Q9UHC7 482 aaKnown RBP11.01□□□□□ -0.65
SPG11-207ENST00000558138 SERPINA10Q9UK55 444 aa11.01□□□□□ -0.65
SPG11-207ENST00000558138 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
SPG11-207ENST00000558138 SPATA5Q8NB90 893 aa11□□□□□ -0.65
SPG11-207ENST00000558138 RAI14Q9P0K7 980 aa11□□□□□ -0.65
SPG11-207ENST00000558138 PGAP2Q9UHJ9 254 aa11□□□□□ -0.65
SPG11-207ENST00000558138 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
SPG11-207ENST00000558138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11□□□□□ -0.65
SPG11-207ENST00000558138 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
SPG11-207ENST00000558138 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
SPG11-207ENST00000558138 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 PRDX5P30044 214 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 TNNI2P48788 182 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 TNFAIP1Q13829 316 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 C2orf69Q8N8R5 385 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 CDCA5Q96FF9 252 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 TDRD3Q9H7E2 651 aaKnown RBP10.99□□□□□ -0.65
SPG11-207ENST00000558138 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 TLR7Q9NYK1 1049 aaKnown RBP10.99□□□□□ -0.65
SPG11-207ENST00000558138 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
SPG11-207ENST00000558138 LRP2BPQ9P2M1 347 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
SPG11-207ENST00000558138 COL1A1P02452 1464 aaPredicted RBP10.99□□□□□ -0.65
SPG11-207ENST00000558138 POLR2AP24928 1970 aaKnown RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 TCP10L2B9ZVM9 353 aa10.98□□□□□ -0.65
SPG11-207ENST00000558138 ARID4AP29374 1257 aaPredicted RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 IRX6P78412 446 aaPredicted RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 GRIK5Q16478 980 aa10.98□□□□□ -0.65
SPG11-207ENST00000558138 PRAMEF18Q5VWM3 479 aa10.98□□□□□ -0.65
SPG11-207ENST00000558138 DLK2Q6UY11 383 aa10.98□□□□□ -0.65
SPG11-207ENST00000558138 EAF2Q96CJ1 260 aaPredicted RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 PRMT6Q96LA8 375 aaPredicted RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 NOL10Q9BSC4 688 aaKnown RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 GBA2Q9HCG7 927 aaPredicted RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
SPG11-207ENST00000558138 DBNLQ9UJU6 430 aaKnown RBP10.98□□□□□ -0.65
SPG11-207ENST00000558138 MCAMP43121 646 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 GSTO1P78417 241 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
SPG11-207ENST00000558138 PRKG1Q13976 671 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 DIXDC1Q155Q3 683 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 DEFB115Q30KQ5 88 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 PI16Q6UXB8 463 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 MTMR14Q8NCE2 650 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 GPATCH3Q96I76 525 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 ZNF70Q9UC06 446 aaPredicted RBP10.97□□□□□ -0.65
SPG11-207ENST00000558138 SALL1Q9NSC2 1324 aa10.97□□□□□ -0.65
SPG11-207ENST00000558138 ECM29Q5VYK3 1845 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.65
SPG11-207ENST00000558138 SMARCA5O60264 1052 aaPredicted RBP10.96□□□□□ -0.65
SPG11-207ENST00000558138 ECE1P42892 770 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 CACNB3P54284 484 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 HUNKP57058 714 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 EXOC6Q8TAG9 804 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 DNAJC2Q99543 621 aaKnown RBP10.96□□□□□ -0.65
SPG11-207ENST00000558138 DEFB129Q9H1M3 183 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 PPP2R3BQ9Y5P8 575 aa10.96□□□□□ -0.65
SPG11-207ENST00000558138 IDH1O75874 414 aaKnown RBP10.95□□□□□ -0.66
SPG11-207ENST00000558138 LDHCP07864 332 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 ZAP70P43403 619 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 MECOMQ03112 1051 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 AAMPQ13685 434 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 CST9Q5W186 159 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
SPG11-207ENST00000558138 HHIPL2Q6UWX4 724 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 ARMC9Q7Z3E5 817 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
SPG11-207ENST00000558138 USP40Q9NVE5 1235 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 DAGLAQ9Y4D2 1042 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
SPG11-207ENST00000558138 CNTNAP1P78357 1384 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 BTDP43251 543 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 RASA3Q14644 834 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 CYP4F22Q6NT55 531 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 MRIQ9BWK5 157 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
SPG11-207ENST00000558138 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 MYH2Q9UKX2 1941 aa10.94□□□□□ -0.66
SPG11-207ENST00000558138 MROH7-TTC4A0A0A0MT08 1334 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 AOX1Q06278 1338 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 PPP1R12BO60237 982 aaPredicted RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 BAG3O95817 575 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 VEGFBP49765 207 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 ZNF157P51786 506 aaPredicted RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 FKBP1BP68106 108 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 TCP10Q12799 353 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 MAP3K12Q12852 859 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms