RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHD8-213ENST00000557364 STX10O60499 249 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 GUCY1B3Q02153 619 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 NLGN1Q8N2Q7 840 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 IQUBQ8NA54 791 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 NPC1L1Q9UHC9 1359 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 SLC39A6Q13433 755 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 CLUL1Q15846 466 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 SSFA2P28290 1259 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 HLTFQ14527 1009 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD8-213ENST00000557364 DLGAP5Q15398 846 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 SYCE3A1L190 88 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 CNGA1P29973 690 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 FAM196AQ6ZSG2 479 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 FNBP1Q96RU3 617 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 CEP170Q5SW79 1584 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 HSPA2P54652 639 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 PDE1AP54750 535 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 YWHAEP62258 255 aaKnown RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 FAM193AP78312 1265 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 PRPF4BQ13523 1007 aaKnown RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 SMCR8Q8TEV9 937 aaPredicted RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 H0YCG3 227 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 P4HA1P13674 534 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 MPNDQ8N594 471 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 TXNDC16Q9P2K2 825 aa9.44□□□□□ -0.9
CHD8-213ENST00000557364 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
CHD8-213ENST00000557364 RAB3GAP1Q15042 981 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 CEP112Q8N8E3 955 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 TTC14Q96N46 770 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 KDM5CP41229 1560 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 EYA2O00167 538 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 CHURC1Q8WUH1 139 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 LPIN2Q92539 896 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 BRF1Q92994 677 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 TSGA10Q9BZW7 698 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 TUBBP07437 444 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 EPB41P11171 864 aaKnown RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 SLC52A2Q9HAB3 445 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 STK10O94804 968 aaKnown RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 GNPTABQ3T906 1256 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 TEKT1Q969V4 418 aa9.43□□□□□ -0.9
CHD8-213ENST00000557364 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 MAK16Q9BXY0 300 aaKnown RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 BLMP54132 1417 aaPredicted RBP9.43□□□□□ -0.9
CHD8-213ENST00000557364 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.91e-6■□□□□ 9.7
CHD8-213ENST00000557364 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 TACC1O75410 805 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ZNF165P49910 485 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 RILPL1Q5EBL4 403 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 NLRX1Q86UT6 975 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 CABLES1Q8TDN4 633 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 NSRP1Q9H0G5 558 aaKnown RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 ODF2LQ9ULJ1 636 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 CALUO43852 315 aaPredicted RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 CCNA1P78396 465 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ELMSAN1Q6PJG2 1045 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 DCPSQ96C86 337 aaKnown RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 LLPHQ9BRT6 129 aaKnown RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 DEXIO95424 95 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ITGA6P23229 1130 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ARHGEF5Q12774 1597 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 KRT86O43790 486 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 PCP11498 1178 aaKnown RBP9.42□□□□□ -0.9
CHD8-213ENST00000557364 NT5C2P49902 561 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 KIF11P52732 1056 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 SULF1Q8IWU6 871 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 JADE2Q9NQC1 790 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 MTUS1Q9ULD2 1270 aa9.42□□□□□ -0.9
CHD8-213ENST00000557364 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 CC2D2BQ6DHV5 1058 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 EYA1Q99502 592 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 ALDH3A1P30838 453 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 SLC1A4P43007 532 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 TRPC3Q13507 836 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms