RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 MRIQ9BWK5 157 aa27.73■■■□□ 2.03
PABPN1-206ENST00000556809 CRKP46108 304 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 RBM5P52756 815 aaKnown RBP eCLIP27.72■■■□□ 2.031e-6■□□□□ 8
PABPN1-206ENST00000556809 AAMPQ13685 434 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 PRAMEF18Q5VWM3 479 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 C2orf69Q8N8R5 385 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 CAPNS2Q96L46 248 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 EXOC6BQ9Y2D4 811 aa27.72■■■□□ 2.03
PABPN1-206ENST00000556809 HUNKP57058 714 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 EXOC6Q8TAG9 804 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 GPR108Q9NPR9 543 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 DENND2AQ9ULE3 1009 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 PCDHB15Q9Y5E8 787 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 PAPPA2Q9BXP8 1791 aa27.71■■■□□ 2.03
PABPN1-206ENST00000556809 SALL1Q9NSC2 1324 aa27.7■■■□□ 2.03
PABPN1-206ENST00000556809 MYO1BO43795 1136 aa27.7■■■□□ 2.02
PABPN1-206ENST00000556809 ECE1P42892 770 aa27.7■■■□□ 2.02
PABPN1-206ENST00000556809 HSP90AB4PQ58FF6 505 aa27.7■■■□□ 2.02
PABPN1-206ENST00000556809 CLRN2A0PK11 232 aa27.69■■■□□ 2.02
PABPN1-206ENST00000556809 FKBP1BP68106 108 aa27.69■■■□□ 2.02
PABPN1-206ENST00000556809 IRX6P78412 446 aaPredicted RBP27.69■■■□□ 2.02
PABPN1-206ENST00000556809 SPDYE2Q495Y8 402 aa27.69■■■□□ 2.02
PABPN1-206ENST00000556809 NEUROD6Q96NK8 337 aa27.69■■■□□ 2.02
PABPN1-206ENST00000556809 DEFB129Q9H1M3 183 aa27.69■■■□□ 2.02
PABPN1-206ENST00000556809 PDS5AQ29RF7 1337 aaKnown RBP27.68■■■□□ 2.02
PABPN1-206ENST00000556809 RASGRF1Q13972 1273 aa27.68■■■□□ 2.02
PABPN1-206ENST00000556809 PAXIP1Q6ZW49 1069 aaPredicted RBP27.68■■■□□ 2.02
PABPN1-206ENST00000556809 ERC1Q8IUD2 1116 aa27.68■■■□□ 2.02
PABPN1-206ENST00000556809 MAST3O60307 1309 aa27.67■■■□□ 2.02
PABPN1-206ENST00000556809 HSPA1AP0DMV8 641 aaKnown RBP27.67■■■□□ 2.02
PABPN1-206ENST00000556809 HSPA1BP0DMV9 641 aaKnown RBP27.67■■■□□ 2.02
PABPN1-206ENST00000556809 TEKT1Q969V4 418 aa27.67■■■□□ 2.02
PABPN1-206ENST00000556809 ZDHHC15Q96MV8 337 aa27.67■■■□□ 2.02
PABPN1-206ENST00000556809 TDRD3Q9H7E2 651 aaKnown RBP27.67■■■□□ 2.02
PABPN1-206ENST00000556809 ZNF70Q9UC06 446 aaPredicted RBP27.67■■■□□ 2.02
PABPN1-206ENST00000556809 PPP2R3BQ9Y5P8 575 aa27.67■■■□□ 2.02
PABPN1-206ENST00000556809 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
PABPN1-206ENST00000556809 TNNI3KQ59H18 835 aa27.66■■■□□ 2.02
PABPN1-206ENST00000556809 HHIPL2Q6UWX4 724 aa27.66■■■□□ 2.02
PABPN1-206ENST00000556809 FPGT-TNNI3KV9GXZ4 949 aa27.66■■■□□ 2.02
PABPN1-206ENST00000556809 PRDX5P30044 214 aa27.65■■■□□ 2.02
PABPN1-206ENST00000556809 APOBEC3HQ6NTF7 200 aaKnown RBP27.65■■■□□ 2.02
PABPN1-206ENST00000556809 RGMBQ6NW40 437 aa27.65■■■□□ 2.02
PABPN1-206ENST00000556809 VEZTQ9HBM0 779 aa27.65■■■□□ 2.02
PABPN1-206ENST00000556809 ARID4AP29374 1257 aaPredicted RBP27.64■■■□□ 2.02
PABPN1-206ENST00000556809 MOB2Q70IA6 237 aa27.64■■■□□ 2.02
PABPN1-206ENST00000556809 WBP1LQ9NX94 342 aa27.64■■■□□ 2.02
PABPN1-206ENST00000556809 FAM155AB1AL88 458 aaPredicted RBP27.63■■■□□ 2.01
PABPN1-206ENST00000556809 AOC2O75106 756 aa27.63■■■□□ 2.01
PABPN1-206ENST00000556809 RAB11FIP3O75154 756 aa27.63■■■□□ 2.01
PABPN1-206ENST00000556809 MAP2K2P36507 400 aa27.63■■■□□ 2.01
PABPN1-206ENST00000556809 GRM1Q13255 1194 aa27.63■■■□□ 2.01
PABPN1-206ENST00000556809 SSC5DA1L4H1 1573 aa27.63■■■□□ 2.01
PABPN1-206ENST00000556809 APBB1O00213 710 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 LDHBP07195 334 aaKnown RBP27.62■■■□□ 2.01
PABPN1-206ENST00000556809 NF2P35240 595 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 RASA3Q14644 834 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 RHPN1Q8TCX5 695 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 KIF1BPQ96EK5 621 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 HMG20BQ9P0W2 317 aa27.62■■■□□ 2.01
PABPN1-206ENST00000556809 AKAP11Q9UKA4 1901 aa27.61■■■□□ 2.01
PABPN1-206ENST00000556809 DIXDC1Q155Q3 683 aa27.61■■■□□ 2.01
PABPN1-206ENST00000556809 GORABQ5T7V8 394 aa27.61■■■□□ 2.01
PABPN1-206ENST00000556809 ZGPATQ8N5A5 531 aaKnown RBP27.61■■■□□ 2.01
PABPN1-206ENST00000556809 DBNDD2Q9BQY9 259 aa27.61■■■□□ 2.01
PABPN1-206ENST00000556809 DCTPP1Q9H773 170 aa27.61■■■□□ 2.01
PABPN1-206ENST00000556809 TNFAIP1Q13829 316 aa27.6■■■□□ 2.01
PABPN1-206ENST00000556809 EAF2Q96CJ1 260 aaPredicted RBP27.6■■■□□ 2.01
PABPN1-206ENST00000556809 DAGLAQ9Y4D2 1042 aa27.6■■■□□ 2.01
PABPN1-206ENST00000556809 MYH2Q9UKX2 1941 aa27.6■■■□□ 2.01
PABPN1-206ENST00000556809 UBE2Q2LH0YL09 131 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 MCAMP43121 646 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 ZNF157P51786 506 aaPredicted RBP27.59■■■□□ 2.01
PABPN1-206ENST00000556809 MAP2K1Q02750 393 aaPredicted RBP27.59■■■□□ 2.01
PABPN1-206ENST00000556809 NBPF12Q5TAG4 269 aaPredicted RBP27.59■■■□□ 2.01
PABPN1-206ENST00000556809 PI16Q6UXB8 463 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 SPATA5Q8NB90 893 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 CCDC102AQ96A19 550 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 TEPSINQ96N21 525 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 ZIC5Q96T25 663 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 IL1RAPL2Q9NP60 686 aa27.59■■■□□ 2.01
PABPN1-206ENST00000556809 UQCRFS1P1P0C7P4 283 aa27.58■■■□□ 2.01
PABPN1-206ENST00000556809 NOGQ13253 232 aa27.58■■■□□ 2.01
PABPN1-206ENST00000556809 HDAC1Q13547 482 aaPredicted RBP27.58■■■□□ 2.01
PABPN1-206ENST00000556809 DBNLQ9UJU6 430 aaKnown RBP27.58■■■□□ 2.01
PABPN1-206ENST00000556809 TCP10L2B9ZVM9 353 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 SLC10A3P09131 477 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 MAP3K11Q16584 847 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 FKBP1CQ5VVH2 108 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 ZNF512BQ96KM6 892 aaPredicted RBP27.57■■■□□ 2
PABPN1-206ENST00000556809 ABCF2Q9UG63 623 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 FZD1Q9UP38 647 aa27.57■■■□□ 2
PABPN1-206ENST00000556809 FOXN1O15353 648 aa27.56■■■□□ 2
PABPN1-206ENST00000556809 CACNB3P54284 484 aa27.56■■■□□ 2
PABPN1-206ENST00000556809 TTLL12Q14166 644 aaPredicted RBP27.56■■■□□ 2
PABPN1-206ENST00000556809 SUPT20HL1Q3ZLR7 823 aa27.56■■■□□ 2
PABPN1-206ENST00000556809 LDLRAD1Q5T700 205 aa27.56■■■□□ 2
PABPN1-206ENST00000556809 RASAL3Q86YV0 1011 aa27.56■■■□□ 2
PABPN1-206ENST00000556809 CLASRPQ8N2M8 674 aaKnown RBP27.56■■■□□ 2
PABPN1-206ENST00000556809 TLR7Q9NYK1 1049 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms