RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 TOB2Q14106 344 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 BLOC1S2Q6QNY1 142 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
HNRNPC-223ENST00000556142 SEMA3EO15041 775 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 NPHP1O15259 732 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 HTRA3P83110 453 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 CAVIN4Q5BKX8 364 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 MAGEB6Q8N7X4 407 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 CRAMP1Q96RY5 1269 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 GNL3LQ9NVN8 582 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 DENND2AQ9ULE3 1009 aa11.29□□□□□ -0.6
HNRNPC-223ENST00000556142 E7EWF7 191 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 BBOX1O75936 387 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 ALX1Q15699 326 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 ME3Q16798 604 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 PATL2C9JE40 543 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 MCM4P33991 863 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 NUCB2P80303 420 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 GPSM2P81274 684 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 PKP1Q13835 747 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 ZNF384Q8TF68 577 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 BCS1LQ9Y276 419 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 MYH7P12883 1935 aa11.28□□□□□ -0.6
HNRNPC-223ENST00000556142 XDHP47989 1333 aa11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 FSTL1Q12841 308 aa11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 FBXL16Q8N461 479 aa11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
HNRNPC-223ENST00000556142 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 TGFB2P61812 414 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 ANKRD1Q15327 319 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 EPB41L4AQ9HCS5 686 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
HNRNPC-223ENST00000556142 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 MBD4O95243 580 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 BRD1O95696 1058 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 MMP10P09238 476 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 SRGNP10124 158 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 IMMTQ16891 758 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 Q6ZUG5 572 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 LCORLQ8N3X6 602 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 LRP2BPQ9P2M1 347 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 CACNA1SQ13698 1873 aa11.25□□□□□ -0.61
HNRNPC-223ENST00000556142 ZNF213O14771 459 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 IGSF3O75054 1194 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 CYP7A1P22680 504 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 MB21D2Q8IYB1 491 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 TACC3Q9Y6A5 838 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 SALL1Q9NSC2 1324 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 PRKAB2O43741 272 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 NPR1P16066 1061 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 GNAT2P19087 354 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 EVCP57679 992 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 HAND2P61296 217 aa11.24□□□□□ -0.61
HNRNPC-223ENST00000556142 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms