RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 B4E1Z4 1266 aa19.32■□□□□ 0.68
PCNX1-209ENST00000554879 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
PCNX1-209ENST00000554879 FGAP02671 866 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 RXRBP28702 533 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 E7EWF7 191 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 POLR3DP05423 398 aaPredicted RBP19.31■□□□□ 0.68
PCNX1-209ENST00000554879 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
PCNX1-209ENST00000554879 INTS4Q96HW7 963 aaKnown RBP19.31■□□□□ 0.68
PCNX1-209ENST00000554879 PIH1D3Q9NQM4 214 aaKnown RBP19.31■□□□□ 0.68
PCNX1-209ENST00000554879 STRCQ7RTU9 1775 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 NECTIN1Q15223 517 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 ZSWIM6Q9HCJ5 1215 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 SERPINB2P05120 415 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCNX1-209ENST00000554879 TPCN1Q9ULQ1 816 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 SLC12A7Q9Y666 1083 aa19.31■□□□□ 0.68
PCNX1-209ENST00000554879 PHRF1Q9P1Y6 1649 aaKnown RBP19.3■□□□□ 0.68
PCNX1-209ENST00000554879 SPATA32Q96LK8 384 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
PCNX1-209ENST00000554879 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
PCNX1-209ENST00000554879 CNPY2Q9Y2B0 182 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 FNBP4Q8N3X1 1017 aaPredicted RBP19.3■□□□□ 0.68
PCNX1-209ENST00000554879 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
PCNX1-209ENST00000554879 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 MKNK2Q9HBH9 465 aa19.3■□□□□ 0.68
PCNX1-209ENST00000554879 DSCC1Q9BVC3 393 aa19.29■□□□□ 0.68
PCNX1-209ENST00000554879 PRDM1O75626 825 aa19.29■□□□□ 0.68
PCNX1-209ENST00000554879 CYP2E1P05181 493 aaPredicted RBP19.29■□□□□ 0.68
PCNX1-209ENST00000554879 GOLGA8AA7E2F4 631 aa19.29■□□□□ 0.68
PCNX1-209ENST00000554879 SAMD1Q6SPF0 538 aaPredicted RBP19.29■□□□□ 0.68
PCNX1-209ENST00000554879 TM6SF1Q9BZW5 370 aa19.29■□□□□ 0.68
PCNX1-209ENST00000554879 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
PCNX1-209ENST00000554879 EPB41L2O43491 1005 aaKnown RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 LARGE1O95461 756 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 NTSR2O95665 410 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 RBM17Q96I25 401 aaKnown RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 HMGB2P26583 209 aaKnown RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 ZNF804AQ7Z570 1209 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 ZC3H12CQ9C0D7 883 aaKnown RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 SYCE3A1L190 88 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 C8orf76Q96K31 380 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 JAK2O60674 1132 aa19.28■□□□□ 0.68
PCNX1-209ENST00000554879 DNM1Q05193 864 aaKnown RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
PCNX1-209ENST00000554879 U2AF2P26368 475 aaKnown RBP eCLIP19.27■□□□□ 0.681e-6■■□□□ 13.1
PCNX1-209ENST00000554879 ME1P48163 572 aa19.27■□□□□ 0.68
PCNX1-209ENST00000554879 METAP2P50579 478 aaKnown RBP eCLIP19.27■□□□□ 0.68
PCNX1-209ENST00000554879 NFIXQ14938 502 aa19.27■□□□□ 0.68
PCNX1-209ENST00000554879 ZSCAN29Q8IWY8 852 aaPredicted RBP19.27■□□□□ 0.68
PCNX1-209ENST00000554879 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
PCNX1-209ENST00000554879 SPTY2D1Q68D10 685 aaPredicted RBP19.27■□□□□ 0.68
PCNX1-209ENST00000554879 TIGD1Q96MW7 591 aa19.27■□□□□ 0.68
PCNX1-209ENST00000554879 STK38Q15208 465 aa19.27■□□□□ 0.67
PCNX1-209ENST00000554879 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
PCNX1-209ENST00000554879 TXNRD1Q16881 649 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 CCDC73Q6ZRK6 1079 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 IQCA1Q86XH1 822 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 TNNT1P13805 278 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 TMX1Q9H3N1 280 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 GGA1Q9UJY5 639 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 MINPP1Q9UNW1 487 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
PCNX1-209ENST00000554879 F13A1P00488 732 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 UBE4AQ14139 1066 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 ZNF804BA4D1E1 1349 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 PRKAB2O43741 272 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 MYL10Q9BUA6 226 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 PLEKHG2Q9H7P9 1386 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 CDKL5O76039 1030 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 ADD2P35612 726 aa19.25■□□□□ 0.67
PCNX1-209ENST00000554879 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
PCNX1-209ENST00000554879 PTPDC1A2A3K4 754 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 TSPY2A6NKD2 308 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 BAG3O95817 575 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 RASSF8Q8NHQ8 419 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 GOLGA6L6A8MZA4 724 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 WTAPQ15007 396 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 ZBTB43O43298 467 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 UTP14CQ5TAP6 766 aaKnown RBP19.24■□□□□ 0.67
PCNX1-209ENST00000554879 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
PCNX1-209ENST00000554879 CACNA1FO60840 1977 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 ZKSCAN5Q9Y2L8 839 aa19.24■□□□□ 0.67
PCNX1-209ENST00000554879 FAM208AQ9UK61 1670 aaKnown RBP19.24■□□□□ 0.67
PCNX1-209ENST00000554879 LDHCP07864 332 aa19.23■□□□□ 0.67
PCNX1-209ENST00000554879 CAMK4Q16566 473 aa19.23■□□□□ 0.67
PCNX1-209ENST00000554879 SPC24Q8NBT2 197 aa19.23■□□□□ 0.67
PCNX1-209ENST00000554879 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms