RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
SHMT2-211ENST00000554310 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
SHMT2-211ENST00000554310 PCDHAC2Q9Y5I4 1007 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 CLRN2A0PK11 232 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 MAP2K2P36507 400 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 NOGQ13253 232 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 TNFAIP1Q13829 316 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 GRIK5Q16478 980 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 RGMBQ6NW40 437 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-211ENST00000554310 AIDAQ96BJ3 306 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 XAGE2Q96GT9 111 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 MRIQ9BWK5 157 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 DEFB129Q9H1M3 183 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
SHMT2-211ENST00000554310 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
SHMT2-211ENST00000554310 OS9Q13438 667 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-211ENST00000554310 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
SHMT2-211ENST00000554310 VEZTQ9HBM0 779 aa16.12■□□□□ 0.17
SHMT2-211ENST00000554310 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
SHMT2-211ENST00000554310 AOX1Q06278 1338 aa16.12■□□□□ 0.17
SHMT2-211ENST00000554310 SSC5DA1L4H1 1573 aa16.12■□□□□ 0.17
SHMT2-211ENST00000554310 TIMM10P62072 90 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 PRAMEF18Q5VWM3 479 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 ZGPATQ8N5A5 531 aaKnown RBP16.11■□□□□ 0.17
SHMT2-211ENST00000554310 ZDHHC15Q96MV8 337 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 ZNF70Q9UC06 446 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-211ENST00000554310 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
SHMT2-211ENST00000554310 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
SHMT2-211ENST00000554310 AOC2O75106 756 aa16.1■□□□□ 0.17
SHMT2-211ENST00000554310 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
SHMT2-211ENST00000554310 NEFLP07196 543 aa16.1■□□□□ 0.17
SHMT2-211ENST00000554310 ZNF157P51786 506 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-211ENST00000554310 TTLL12Q14166 644 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-211ENST00000554310 HHIPL2Q6UWX4 724 aa16.1■□□□□ 0.17
SHMT2-211ENST00000554310 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
SHMT2-211ENST00000554310 TDRD3Q9H7E2 651 aaKnown RBP16.1■□□□□ 0.17
SHMT2-211ENST00000554310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-211ENST00000554310 FAM155AB1AL88 458 aaPredicted RBP16.09■□□□□ 0.17
SHMT2-211ENST00000554310 LDHBP07195 334 aaKnown RBP16.09■□□□□ 0.17
SHMT2-211ENST00000554310 SLC10A3P09131 477 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 PRDX5P30044 214 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 TNNI2P48788 182 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 ARMC9Q7Z3E5 817 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 BEGAINQ9BUH8 593 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
SHMT2-211ENST00000554310 FOXN1O15353 648 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 ARID4AP29374 1257 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-211ENST00000554310 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-211ENST00000554310 RASA3Q14644 834 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 MAST2Q6P0Q8 1798 aa16.08■□□□□ 0.16
SHMT2-211ENST00000554310 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 CA12O43570 354 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 HMMRO75330 724 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 UQCRFS1P1P0C7P4 283 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 FKBP1CQ5VVH2 108 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
SHMT2-211ENST00000554310 MOB2Q70IA6 237 aa16.07■□□□□ 0.16
SHMT2-211ENST00000554310 RPAP2Q8IXW5 612 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-211ENST00000554310 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
SHMT2-211ENST00000554310 LAMB1P07942 1786 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 UBE2Q2LH0YL09 131 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-211ENST00000554310 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 HSP90AB4PQ58FF6 505 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-211ENST00000554310 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 ANGEL1Q9UNK9 670 aaKnown RBP16.06■□□□□ 0.16
SHMT2-211ENST00000554310 DAGLAQ9Y4D2 1042 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
SHMT2-211ENST00000554310 UNCXA6NJT0 531 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 PRKG1Q13976 671 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-211ENST00000554310 C20orf194Q5TEA3 1177 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 FAM83AQ86UY5 434 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 DZIP1Q86YF9 867 aaKnown RBP16.05■□□□□ 0.16
SHMT2-211ENST00000554310 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-211ENST00000554310 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
SHMT2-211ENST00000554310 GAKO14976 1311 aa16.04■□□□□ 0.16
SHMT2-211ENST00000554310 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-211ENST00000554310 CCDC158Q5M9N0 1113 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms