RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 KIAA2012Q0VF49 1180 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 ERICH6Q7L0X2 663 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 TTC14Q96N46 770 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.33
PABPN1-203ENST00000553960 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
PABPN1-203ENST00000553960 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
PABPN1-203ENST00000553960 NDUFB9Q9Y6M9 179 aa13.02□□□□□ -0.33
PABPN1-203ENST00000553960 PATL2C9JE40 543 aaKnown RBP13.01□□□□□ -0.33
PABPN1-203ENST00000553960 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
PABPN1-203ENST00000553960 LDHCP07864 332 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 LRP2BPQ9P2M1 347 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 ANAPC4Q9UJX5 808 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 GAKO14976 1311 aa13.01□□□□□ -0.33
PABPN1-203ENST00000553960 M0R2C6 588 aa13□□□□□ -0.33
PABPN1-203ENST00000553960 FGRP09769 529 aa13□□□□□ -0.33
PABPN1-203ENST00000553960 STRIP1Q5VSL9 837 aa13□□□□□ -0.33
PABPN1-203ENST00000553960 RASEFQ8IZ41 740 aa13□□□□□ -0.33
PABPN1-203ENST00000553960 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.335e-8■■□□□ 13.2
PABPN1-203ENST00000553960 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
PABPN1-203ENST00000553960 PALD1Q9ULE6 856 aa13□□□□□ -0.33
PABPN1-203ENST00000553960 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
PABPN1-203ENST00000553960 FGAP02671 866 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 EVCP57679 992 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 MECOMQ03112 1051 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 INTS4Q96HW7 963 aaKnown RBP12.99□□□□□ -0.33
PABPN1-203ENST00000553960 ATP8A2Q9NTI2 1148 aa12.99□□□□□ -0.33
PABPN1-203ENST00000553960 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
PABPN1-203ENST00000553960 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 GSG1L2A8MUP6 293 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 K7ELQ4 463 aaPredicted RBP12.98□□□□□ -0.33
PABPN1-203ENST00000553960 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
PABPN1-203ENST00000553960 CYP21A2P08686 494 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
PABPN1-203ENST00000553960 DPEP1P16444 411 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 PLCG2P16885 1265 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 CHRNA5P30532 468 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 CUL4AQ13619 759 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
PABPN1-203ENST00000553960 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
PABPN1-203ENST00000553960 HHIPL2Q6UWX4 724 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 AIDAQ96BJ3 306 aa12.98□□□□□ -0.33
PABPN1-203ENST00000553960 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 CYP7A1P22680 504 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 DDIT3P35638 169 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 IMMTQ16891 758 aaKnown RBP12.97□□□□□ -0.33
PABPN1-203ENST00000553960 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 NACAP1Q9BZK3 213 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
PABPN1-203ENST00000553960 CYP46A1Q9Y6A2 500 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 MYH2Q9UKX2 1941 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 FOCADQ5VW36 1801 aa12.97□□□□□ -0.33
PABPN1-203ENST00000553960 FRAT2O75474 233 aaPredicted RBP12.96□□□□□ -0.33
PABPN1-203ENST00000553960 BAG3O95817 575 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 CHGBP05060 677 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 PRDX5P30044 214 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 NEK4P51957 841 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
PABPN1-203ENST00000553960 DALRD3Q5D0E6 543 aaKnown RBP12.96□□□□□ -0.33
PABPN1-203ENST00000553960 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
PABPN1-203ENST00000553960 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
PABPN1-203ENST00000553960 RAI14Q9P0K7 980 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 ABCF2Q9UG63 623 aa12.96□□□□□ -0.33
PABPN1-203ENST00000553960 SCN9AQ15858 1988 aa12.96□□□□□ -0.34
PABPN1-203ENST00000553960 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 MBD4O95243 580 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 ZBTB7AO95365 584 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 CCDC129Q6ZRS4 1044 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
PABPN1-203ENST00000553960 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
PABPN1-203ENST00000553960 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
PABPN1-203ENST00000553960 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 DDX60LQ5H9U9 1706 aaKnown RBP12.94□□□□□ -0.34
PABPN1-203ENST00000553960 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
PABPN1-203ENST00000553960 RCAN1P53805 252 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 ADCK5Q3MIX3 580 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms