RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 ESYT1Q9BSJ8 1104 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 RNF181Q9P0P0 153 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 M0R2C6 588 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 SEC24BO95487 1268 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 ZFYP08048 801 aaPredicted RBP17.01■□□□□ 0.31
PRKCH-206ENST00000553830 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 IL25Q9H293 177 aa17.01■□□□□ 0.31
PRKCH-206ENST00000553830 SCNN1DP51172 638 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
PRKCH-206ENST00000553830 CXCL9Q07325 125 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 APPBP2Q92624 585 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
PRKCH-206ENST00000553830 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
PRKCH-206ENST00000553830 GJA3Q9Y6H8 435 aa17■□□□□ 0.31
PRKCH-206ENST00000553830 MAST3O60307 1309 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 ZBTB22O15209 634 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 ADGRA1Q86SQ6 560 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
PRKCH-206ENST00000553830 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
PRKCH-206ENST00000553830 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
PRKCH-206ENST00000553830 TCRBV5S4A2TA0A5A2 114 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 SGSM2O43147 1006 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 GRIN3BO60391 1043 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 MBD4O95243 580 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
PRKCH-206ENST00000553830 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 PUS7LQ9H0K6 701 aaKnown RBP16.98■□□□□ 0.31
PRKCH-206ENST00000553830 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
PRKCH-206ENST00000553830 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKCH-206ENST00000553830 DYNLL1P63167 89 aaKnown RBP16.97■□□□□ 0.31
PRKCH-206ENST00000553830 GSTO1P78417 241 aa16.97■□□□□ 0.31
PRKCH-206ENST00000553830 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
PRKCH-206ENST00000553830 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
PRKCH-206ENST00000553830 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
PRKCH-206ENST00000553830 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
PRKCH-206ENST00000553830 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
PRKCH-206ENST00000553830 RAD50Q92878 1312 aa16.96■□□□□ 0.31
PRKCH-206ENST00000553830 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
PRKCH-206ENST00000553830 GPAA1O43292 621 aa16.96■□□□□ 0.31
PRKCH-206ENST00000553830 VIL1P09327 827 aaKnown RBP16.96■□□□□ 0.31
PRKCH-206ENST00000553830 TNIP1Q15025 636 aa16.96■□□□□ 0.31
PRKCH-206ENST00000553830 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
PRKCH-206ENST00000553830 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKCH-206ENST00000553830 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.3
PRKCH-206ENST00000553830 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.3
PRKCH-206ENST00000553830 FZD9O00144 591 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 LDHCP07864 332 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 FKBP1AP62942 108 aaKnown RBP16.95■□□□□ 0.3
PRKCH-206ENST00000553830 LCORLQ8N3X6 602 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
PRKCH-206ENST00000553830 REC8O95072 547 aa16.94■□□□□ 0.3
PRKCH-206ENST00000553830 SLF2Q8IX21 1173 aa16.94■□□□□ 0.3
PRKCH-206ENST00000553830 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
PRKCH-206ENST00000553830 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 APPP05067 770 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 BTDP43251 543 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 CRKP46108 304 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 GMPSP49915 693 aaPredicted RBP16.93■□□□□ 0.3
PRKCH-206ENST00000553830 PTH1RQ03431 593 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
PRKCH-206ENST00000553830 DAGLAQ9Y4D2 1042 aa16.93■□□□□ 0.3
PRKCH-206ENST00000553830 PRKAB2O43741 272 aa16.92■□□□□ 0.3
PRKCH-206ENST00000553830 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
PRKCH-206ENST00000553830 LSG1Q9H089 658 aaKnown RBP16.92■□□□□ 0.3
PRKCH-206ENST00000553830 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
PRKCH-206ENST00000553830 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
PRKCH-206ENST00000553830 BAG3O95817 575 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 RBM26Q5T8P6 1007 aaKnown RBP16.91■□□□□ 0.3
PRKCH-206ENST00000553830 SH3RF3Q8TEJ3 882 aaPredicted RBP16.91■□□□□ 0.3
PRKCH-206ENST00000553830 STRBPQ96SI9 672 aaKnown RBP16.91■□□□□ 0.3
PRKCH-206ENST00000553830 GMLQ99445 158 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 MYH1P12882 1939 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
PRKCH-206ENST00000553830 MICALL2Q8IY33 904 aa16.9■□□□□ 0.3
PRKCH-206ENST00000553830 OGFOD1Q8N543 542 aa16.9■□□□□ 0.3
PRKCH-206ENST00000553830 SDR42E1Q8WUS8 393 aa16.9■□□□□ 0.3
PRKCH-206ENST00000553830 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
PRKCH-206ENST00000553830 GAKO14976 1311 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms