RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TAF1DQ9H5J8 278 aaPredicted RBP26.11■■□□□ 1.77
NEK3-202ENST00000550841 COL1A1P02452 1464 aaPredicted RBP26.11■■□□□ 1.77
NEK3-202ENST00000550841 F8W031 263 aaPredicted RBP26.1■■□□□ 1.77
NEK3-202ENST00000550841 HDLBPQ00341 1268 aaKnown RBP26.1■■□□□ 1.77
NEK3-202ENST00000550841 PI16Q6UXB8 463 aa26.1■■□□□ 1.77
NEK3-202ENST00000550841 USP50Q70EL3 339 aaPredicted RBP26.1■■□□□ 1.77
NEK3-202ENST00000550841 LRP2BPQ9P2M1 347 aa26.1■■□□□ 1.77
NEK3-202ENST00000550841 CYP2E1P05181 493 aaPredicted RBP26.09■■□□□ 1.77
NEK3-202ENST00000550841 PDE1AP54750 535 aa26.09■■□□□ 1.77
NEK3-202ENST00000550841 SLF2Q8IX21 1173 aa26.09■■□□□ 1.77
NEK3-202ENST00000550841 JMYQ8N9B5 988 aa26.09■■□□□ 1.77
NEK3-202ENST00000550841 OTUD7AQ8TE49 926 aaPredicted RBP26.09■■□□□ 1.77
NEK3-202ENST00000550841 AKAP11Q9UKA4 1901 aa26.09■■□□□ 1.77
NEK3-202ENST00000550841 SALL3Q9BXA9 1300 aa26.09■■□□□ 1.77
NEK3-202ENST00000550841 DNAJC2Q99543 621 aaKnown RBP26.08■■□□□ 1.77
NEK3-202ENST00000550841 MYOZ2Q9NPC6 264 aa26.08■■□□□ 1.77
NEK3-202ENST00000550841 SERPINA10Q9UK55 444 aa26.08■■□□□ 1.77
NEK3-202ENST00000550841 ZNF646O15015 1829 aaPredicted RBP26.08■■□□□ 1.77
NEK3-202ENST00000550841 AOX1Q06278 1338 aa26.08■■□□□ 1.77
NEK3-202ENST00000550841 TBC1D9Q6ZT07 1266 aa26.07■■□□□ 1.76
NEK3-202ENST00000550841 DZIP1Q86YF9 867 aaKnown RBP26.07■■□□□ 1.76
NEK3-202ENST00000550841 RAI14Q9P0K7 980 aa26.07■■□□□ 1.76
NEK3-202ENST00000550841 PRDX5P30044 214 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 GSTO1P78417 241 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 DLGAP5Q15398 846 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 RBM26Q5T8P6 1007 aaKnown RBP26.06■■□□□ 1.76
NEK3-202ENST00000550841 TMED8Q6PL24 325 aaPredicted RBP26.06■■□□□ 1.76
NEK3-202ENST00000550841 PLEKHM2Q8IWE5 1019 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 MTMR14Q8NCE2 650 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 TEKT1Q969V4 418 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 OSBPL3Q9H4L5 887 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 PAG1Q9NWQ8 432 aa26.06■■□□□ 1.76
NEK3-202ENST00000550841 GOLIM4O00461 696 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 LDHCP07864 332 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 RBM5P52756 815 aaKnown RBP eCLIP26.05■■□□□ 1.76
NEK3-202ENST00000550841 GRIK5Q16478 980 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 KIF4BQ2VIQ3 1234 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 HHIPL2Q6UWX4 724 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 SAMD7Q7Z3H4 446 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 PI4K2BQ8TCG2 481 aa26.05■■□□□ 1.76
NEK3-202ENST00000550841 SHTN1A0MZ66 631 aa26.04■■□□□ 1.76
NEK3-202ENST00000550841 MAP3K12Q12852 859 aa26.04■■□□□ 1.76
NEK3-202ENST00000550841 TBC1D10BQ4KMP7 808 aaPredicted RBP26.04■■□□□ 1.76
NEK3-202ENST00000550841 TSHZ3Q63HK5 1081 aa26.04■■□□□ 1.76
NEK3-202ENST00000550841 CRKP46108 304 aa26.03■■□□□ 1.76
NEK3-202ENST00000550841 CFAP100Q494V2 611 aa26.03■■□□□ 1.76
NEK3-202ENST00000550841 EAPPQ56P03 285 aaPredicted RBP26.03■■□□□ 1.76
NEK3-202ENST00000550841 ZC3H15Q8WU90 426 aaKnown RBP26.03■■□□□ 1.76
NEK3-202ENST00000550841 ANTXR1Q9H6X2 564 aa26.03■■□□□ 1.76
NEK3-202ENST00000550841 PIH1D3Q9NQM4 214 aaKnown RBP26.03■■□□□ 1.76
NEK3-202ENST00000550841 NDUFB9Q9Y6M9 179 aa26.03■■□□□ 1.76
NEK3-202ENST00000550841 IDH1O75874 414 aaKnown RBP26.02■■□□□ 1.76
NEK3-202ENST00000550841 MECOMQ03112 1051 aa26.02■■□□□ 1.76
NEK3-202ENST00000550841 FAM163AQ96GL9 167 aaPredicted RBP26.02■■□□□ 1.76
NEK3-202ENST00000550841 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.02■■□□□ 1.76
NEK3-202ENST00000550841 MYO1BO43795 1136 aa26.01■■□□□ 1.75
NEK3-202ENST00000550841 PDE4AP27815 886 aa26.01■■□□□ 1.75
NEK3-202ENST00000550841 LRRFIP1Q32MZ4 808 aaKnown RBP26.01■■□□□ 1.75
NEK3-202ENST00000550841 TRPM4Q8TD43 1214 aa26.01■■□□□ 1.75
NEK3-202ENST00000550841 NSUN4Q96CB9 384 aaKnown RBP26.01■■□□□ 1.75
NEK3-202ENST00000550841 ZDHHC15Q96MV8 337 aa26.01■■□□□ 1.75
NEK3-202ENST00000550841 CLEC11AQ9Y240 323 aa26.01■■□□□ 1.75
NEK3-202ENST00000550841 NAA16Q6N069 864 aaPredicted RBP26■■□□□ 1.75
NEK3-202ENST00000550841 ZSCAN25Q6NSZ9 544 aa26■■□□□ 1.75
NEK3-202ENST00000550841 CHADLQ6NUI6 762 aa26■■□□□ 1.75
NEK3-202ENST00000550841 LDHDQ86WU2 507 aa26■■□□□ 1.75
NEK3-202ENST00000550841 WNT10BO00744 389 aa25.99■■□□□ 1.75
NEK3-202ENST00000550841 HIRAP54198 1017 aaPredicted RBP25.99■■□□□ 1.75
NEK3-202ENST00000550841 ZBED3Q96IU2 234 aaPredicted RBP25.99■■□□□ 1.75
NEK3-202ENST00000550841 SPDYE2BA6NHP3 402 aa25.98■■□□□ 1.75
NEK3-202ENST00000550841 SPDYE6P0CI01 402 aa25.98■■□□□ 1.75
NEK3-202ENST00000550841 EDC3Q96F86 508 aaKnown RBP25.98■■□□□ 1.75
NEK3-202ENST00000550841 PGAP2Q9UHJ9 254 aa25.98■■□□□ 1.75
NEK3-202ENST00000550841 EGFRP00533 1210 aa25.97■■□□□ 1.75
NEK3-202ENST00000550841 DIXDC1Q155Q3 683 aa25.97■■□□□ 1.75
NEK3-202ENST00000550841 KBTBD3Q8NAB2 608 aa25.97■■□□□ 1.75
NEK3-202ENST00000550841 EVI5LQ96CN4 794 aa25.97■■□□□ 1.75
NEK3-202ENST00000550841 PRMT6Q96LA8 375 aaPredicted RBP25.97■■□□□ 1.75
NEK3-202ENST00000550841 NOL10Q9BSC4 688 aaKnown RBP25.97■■□□□ 1.75
NEK3-202ENST00000550841 NBPF9Q3BBW0 867 aa25.96■■□□□ 1.75
NEK3-202ENST00000550841 SLC9C2Q5TAH2 1124 aa25.96■■□□□ 1.75
NEK3-202ENST00000550841 TICAM2Q86XR7 235 aa25.96■■□□□ 1.75
NEK3-202ENST00000550841 DCPSQ96C86 337 aaKnown RBP25.96■■□□□ 1.75
NEK3-202ENST00000550841 DAGLAQ9Y4D2 1042 aa25.96■■□□□ 1.75
NEK3-202ENST00000550841 MROH7-TTC4A0A0A0MT08 1334 aa25.95■■□□□ 1.75
NEK3-202ENST00000550841 GAKO14976 1311 aa25.95■■□□□ 1.75
NEK3-202ENST00000550841 BAG3O95817 575 aa25.95■■□□□ 1.74
NEK3-202ENST00000550841 MAP4K4O95819 1239 aaPredicted RBP25.95■■□□□ 1.74
NEK3-202ENST00000550841 CYP7A1P22680 504 aa25.95■■□□□ 1.74
NEK3-202ENST00000550841 CNTROBQ8N137 903 aa25.95■■□□□ 1.74
NEK3-202ENST00000550841 MAGEB6Q8N7X4 407 aa25.95■■□□□ 1.74
NEK3-202ENST00000550841 MYH2Q9UKX2 1941 aa25.94■■□□□ 1.74
NEK3-202ENST00000550841 GPR75-ASB3A0A0A6YYF3 556 aa25.94■■□□□ 1.74
NEK3-202ENST00000550841 TRIM6-TRIM34B2RNG4 842 aa25.94■■□□□ 1.74
NEK3-202ENST00000550841 ZFYP08048 801 aaPredicted RBP25.94■■□□□ 1.74
NEK3-202ENST00000550841 APOBEC3HQ6NTF7 200 aaKnown RBP25.94■■□□□ 1.74
NEK3-202ENST00000550841 TMOD2Q9NZR1 351 aa25.94■■□□□ 1.74
NEK3-202ENST00000550841 PITPNM2Q9BZ72 1349 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 POTEIP0CG38 1075 aa25.93■■□□□ 1.74
NEK3-202ENST00000550841 POTEJP0CG39 1038 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms