RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SUGT1Q9Y2Z0 365 aa15.9■□□□□ 0.14
RAB5C-206ENST00000550406 GOLIM4O00461 696 aa15.89■□□□□ 0.13
RAB5C-206ENST00000550406 GLRX3O76003 335 aaKnown RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 MAP4K4O95819 1239 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 HIRAP54198 1017 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 ZBED3Q96IU2 234 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 TAF1DQ9H5J8 278 aaPredicted RBP15.89■□□□□ 0.13
RAB5C-206ENST00000550406 PAG1Q9NWQ8 432 aa15.89■□□□□ 0.13
RAB5C-206ENST00000550406 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
RAB5C-206ENST00000550406 AOX1Q06278 1338 aa15.89■□□□□ 0.13
RAB5C-206ENST00000550406 ERC2O15083 957 aa15.88■□□□□ 0.13
RAB5C-206ENST00000550406 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
RAB5C-206ENST00000550406 MECOMQ03112 1051 aa15.88■□□□□ 0.13
RAB5C-206ENST00000550406 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
RAB5C-206ENST00000550406 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
RAB5C-206ENST00000550406 TRPM4Q8TD43 1214 aa15.88■□□□□ 0.13
RAB5C-206ENST00000550406 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
RAB5C-206ENST00000550406 GTF3C3Q9Y5Q9 886 aa15.88■□□□□ 0.13
RAB5C-206ENST00000550406 H7C1D1 291 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
RAB5C-206ENST00000550406 EPHX2P34913 555 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 DIXDC1Q155Q3 683 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
RAB5C-206ENST00000550406 SPTY2D1Q68D10 685 aaPredicted RBP15.87■□□□□ 0.13
RAB5C-206ENST00000550406 MRIQ9BWK5 157 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 MYOZ2Q9NPC6 264 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
RAB5C-206ENST00000550406 LRP2BPQ9P2M1 347 aa15.87■□□□□ 0.13
RAB5C-206ENST00000550406 CDK5RAP2Q96SN8 1893 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 KIF3CO14782 793 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 CHGBP05060 677 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 CRKP46108 304 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 HDLBPQ00341 1268 aaKnown RBP15.86■□□□□ 0.13
RAB5C-206ENST00000550406 CFAP100Q494V2 611 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 SLFNL1Q499Z3 407 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 RBM26Q5T8P6 1007 aaKnown RBP15.86■□□□□ 0.13
RAB5C-206ENST00000550406 MTMR14Q8NCE2 650 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 PRMT6Q96LA8 375 aaPredicted RBP15.86■□□□□ 0.13
RAB5C-206ENST00000550406 GPBP1L1Q9HC44 474 aaPredicted RBP15.86■□□□□ 0.13
RAB5C-206ENST00000550406 RAI14Q9P0K7 980 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 HDAC9Q9UKV0 1011 aa15.86■□□□□ 0.13
RAB5C-206ENST00000550406 GSPT1P15170 499 aaKnown RBP15.85■□□□□ 0.13
RAB5C-206ENST00000550406 MMP14P50281 582 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 TTF1Q15361 905 aaPredicted RBP15.85■□□□□ 0.13
RAB5C-206ENST00000550406 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 NBPF9Q3BBW0 867 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 HHIPL2Q6UWX4 724 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 ADGRA1Q86SQ6 560 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 DAGLAQ9Y4D2 1042 aa15.85■□□□□ 0.13
RAB5C-206ENST00000550406 ASTN2O75129 1339 aaPredicted RBP15.85■□□□□ 0.13
RAB5C-206ENST00000550406 WNT10BO00744 389 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 IDH1O75874 414 aaKnown RBP15.84■□□□□ 0.13
RAB5C-206ENST00000550406 TTC22Q5TAA0 569 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
RAB5C-206ENST00000550406 USP50Q70EL3 339 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-206ENST00000550406 KBTBD3Q8NAB2 608 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 TEKT1Q969V4 418 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
RAB5C-206ENST00000550406 GAKO14976 1311 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 MAST3O60307 1309 aa15.84■□□□□ 0.13
RAB5C-206ENST00000550406 TCRBV5S4A2TA0A5A2 114 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 PDE6AP16499 860 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 RGS3P49796 1198 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 NAA16Q6N069 864 aaPredicted RBP15.83■□□□□ 0.12
RAB5C-206ENST00000550406 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.12
RAB5C-206ENST00000550406 MAGEB6Q8N7X4 407 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 PGAP2Q9UHJ9 254 aa15.83■□□□□ 0.12
RAB5C-206ENST00000550406 IGSF3O75054 1194 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 ADD2P35612 726 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 RBM5P52756 815 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAB5C-206ENST00000550406 MAP3K12Q12852 859 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 SLC9C2Q5TAH2 1124 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 MROH7-TTC4A0A0A0MT08 1334 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 FOCADQ5VW36 1801 aa15.82■□□□□ 0.12
RAB5C-206ENST00000550406 GPR75-ASB3A0A0A6YYF3 556 aa15.81■□□□□ 0.12
RAB5C-206ENST00000550406 CYP7A1P22680 504 aa15.81■□□□□ 0.12
RAB5C-206ENST00000550406 EAPPQ56P03 285 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-206ENST00000550406 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
RAB5C-206ENST00000550406 EVI5LQ96CN4 794 aa15.81■□□□□ 0.12
RAB5C-206ENST00000550406 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
RAB5C-206ENST00000550406 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
RAB5C-206ENST00000550406 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
RAB5C-206ENST00000550406 LDHCP07864 332 aa15.8■□□□□ 0.12
RAB5C-206ENST00000550406 SDSP20132 328 aa15.8■□□□□ 0.12
RAB5C-206ENST00000550406 GSTO1P78417 241 aa15.8■□□□□ 0.12
RAB5C-206ENST00000550406 CDC42EP5Q6NZY7 148 aa15.8■□□□□ 0.12
RAB5C-206ENST00000550406 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
RAB5C-206ENST00000550406 CLRN2A0PK11 232 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 RNF113AO15541 343 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms