RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TIMM10P62072 90 aa21.28■■□□□ 1
CHMP1A-208ENST00000550102 TEKT1Q969V4 418 aa21.28■■□□□ 1
CHMP1A-208ENST00000550102 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
CHMP1A-208ENST00000550102 PPP2R3BQ9Y5P8 575 aa21.28■■□□□ 1
CHMP1A-208ENST00000550102 SURF6O75683 361 aaKnown RBP21.27■■□□□ 1
CHMP1A-208ENST00000550102 XAGE2Q96GT9 111 aa21.27■■□□□ 1
CHMP1A-208ENST00000550102 CHMP4BQ9H444 224 aaKnown RBP21.27■■□□□ 1
CHMP1A-208ENST00000550102 VEZTQ9HBM0 779 aa21.27■■□□□ 1
CHMP1A-208ENST00000550102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.27■■□□□ 1
CHMP1A-208ENST00000550102 MAST2Q6P0Q8 1798 aa21.27■■□□□ 1
CHMP1A-208ENST00000550102 AOX1Q06278 1338 aa21.27■□□□□ 0.99
CHMP1A-208ENST00000550102 PDS5AQ29RF7 1337 aaKnown RBP21.27■□□□□ 0.99
CHMP1A-208ENST00000550102 SALL1Q9NSC2 1324 aa21.27■□□□□ 0.99
CHMP1A-208ENST00000550102 RASGRF1Q13972 1273 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 PDE3AQ14432 1141 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 SPDYE2Q495Y8 402 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 NEUROD6Q96NK8 337 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 DEFB129Q9H1M3 183 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 OTOFQ9HC10 1997 aa21.26■□□□□ 0.99
CHMP1A-208ENST00000550102 TNFAIP1Q13829 316 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 RGMBQ6NW40 437 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 GPR108Q9NPR9 543 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 NOP58Q9Y2X3 529 aaKnown RBP21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
CHMP1A-208ENST00000550102 SSC5DA1L4H1 1573 aa21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 MAP2K1Q02750 393 aaPredicted RBP21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 ZGPATQ8N5A5 531 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 ZDHHC15Q96MV8 337 aa21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 TDRD3Q9H7E2 651 aaKnown RBP21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 ZNF70Q9UC06 446 aaPredicted RBP21.24■□□□□ 0.99
CHMP1A-208ENST00000550102 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 PRDX5P30044 214 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 MAP2K2P36507 400 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 NOGQ13253 232 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 TTLL12Q14166 644 aaPredicted RBP21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 TNNI3KQ59H18 835 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 MRIQ9BWK5 157 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 FPGT-TNNI3KV9GXZ4 949 aa21.23■□□□□ 0.99
CHMP1A-208ENST00000550102 AOC2O75106 756 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 ZNF157P51786 506 aaPredicted RBP21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 C20orf194Q5TEA3 1177 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 HHIPL2Q6UWX4 724 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 WBP1LQ9NX94 342 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 TMOD2Q9NZR1 351 aa21.22■□□□□ 0.99
CHMP1A-208ENST00000550102 LAMB1P07942 1786 aa21.21■□□□□ 0.99
CHMP1A-208ENST00000550102 HMMRO75330 724 aa21.21■□□□□ 0.99
CHMP1A-208ENST00000550102 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
CHMP1A-208ENST00000550102 RASA3Q14644 834 aa21.21■□□□□ 0.99
CHMP1A-208ENST00000550102 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
CHMP1A-208ENST00000550102 AK9Q5TCS8 1911 aa21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 SLC10A3P09131 477 aa21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 TNNI2P48788 182 aa21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 MOB2Q70IA6 237 aa21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 ARMC9Q7Z3E5 817 aa21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
CHMP1A-208ENST00000550102 FAM155AB1AL88 458 aaPredicted RBP21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 FOXN1O15353 648 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 UQCRFS1P1P0C7P4 283 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 DIXDC1Q155Q3 683 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 SUPT20HL1Q3ZLR7 823 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 SPTY2D1Q68D10 685 aaPredicted RBP21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 APOBEC3HQ6NTF7 200 aaKnown RBP21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 DZIP1Q86YF9 867 aaKnown RBP21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 BEGAINQ9BUH8 593 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 EXOC6BQ9Y2D4 811 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 DAGLAQ9Y4D2 1042 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 DOCK2Q92608 1830 aa21.19■□□□□ 0.98
CHMP1A-208ENST00000550102 TCP10L2B9ZVM9 353 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 UBE2Q2LH0YL09 131 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 RASAL3Q86YV0 1011 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 SPATA5Q8NB90 893 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 HMG20BQ9P0W2 317 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 ABCF2Q9UG63 623 aa21.18■□□□□ 0.98
CHMP1A-208ENST00000550102 CTCFP49711 727 aaPredicted RBP21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 PRKG1Q13976 671 aa21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 TTC39AQ5SRH9 613 aa21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 FKBP1CQ5VVH2 108 aa21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 PI16Q6UXB8 463 aa21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 DBNDD2Q9BQY9 259 aa21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 ANGEL1Q9UNK9 670 aaKnown RBP21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 RPAP1Q9BWH6 1393 aaPredicted RBP21.17■□□□□ 0.98
CHMP1A-208ENST00000550102 PPP1R12BO60237 982 aaPredicted RBP21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 MCAMP43121 646 aa21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 CACNB3P54284 484 aa21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 CCDC158Q5M9N0 1113 aa21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 SLF2Q8IX21 1173 aa21.16■□□□□ 0.98
CHMP1A-208ENST00000550102 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
CHMP1A-208ENST00000550102 FAM83AQ86UY5 434 aa21.15■□□□□ 0.98
CHMP1A-208ENST00000550102 SIRT2Q8IXJ6 389 aa21.15■□□□□ 0.98
CHMP1A-208ENST00000550102 TMEM39BQ9GZU3 492 aa21.15■□□□□ 0.98
CHMP1A-208ENST00000550102 DBNLQ9UJU6 430 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms