RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 FBXL16Q8N461 479 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 SMARCC2Q8TAQ2 1214 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 SETDB2Q96T68 719 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 GDPD2Q9HCC8 539 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
CNOT2-208ENST00000548021 BRPF3Q9ULD4 1205 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 MINPP1Q9UNW1 487 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
CNOT2-208ENST00000548021 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 GADD45BO75293 160 aaPredicted RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 PHF14O94880 888 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 MBD4O95243 580 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 CTDNEP1O95476 244 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 XRCC6P12956 609 aaKnown RBP eCLIP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 ALX1Q15699 326 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 ZSCAN23Q3MJ62 389 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 MAGEB6Q8N7X4 407 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 NSUN7Q8NE18 718 aaKnown RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 STRBPQ96SI9 672 aaKnown RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 QTRT2Q9H974 415 aaKnown RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 GRPEL1Q9HAV7 217 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 TNS1Q9HBL0 1735 aaKnown RBP10.06□□□□□ -0.8
CNOT2-208ENST00000548021 DLEC1Q9Y238 1755 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 IRS2Q9Y4H2 1338 aa10.06□□□□□ -0.8
CNOT2-208ENST00000548021 BAZ2AQ9UIF9 1905 aaKnown RBP10.05□□□□□ -0.8
CNOT2-208ENST00000548021 LTBP1Q14766 1721 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 PRC1O43663 620 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 NCLP19338 710 aaKnown RBP10.05□□□□□ -0.8
CNOT2-208ENST00000548021 PDCP20941 246 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-208ENST00000548021 TM4SF1P30408 202 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 GYG1P46976 350 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 EVCP57679 992 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 MAP3K12Q12852 859 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 NFIXQ14938 502 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
CNOT2-208ENST00000548021 CHST3Q7LGC8 479 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 NKX2-3Q8TAU0 364 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 LLPHQ9BRT6 129 aaKnown RBP10.05□□□□□ -0.8
CNOT2-208ENST00000548021 PANK2Q9BZ23 570 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 ARMT1Q9H993 441 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 DENND2AQ9ULE3 1009 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 PNPLA7Q6ZV29 1317 aa10.05□□□□□ -0.8
CNOT2-208ENST00000548021 PTPDC1A2A3K4 754 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 ZNF213O14771 459 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 FIBPO43427 364 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 KLRK1P26718 216 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 RFC4P35249 363 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 MRE11P49959 708 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 RPS8P62241 208 aaKnown RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 FGD1P98174 961 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 DNM1Q05193 864 aaKnown RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 RESTQ13127 1097 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 TRAPPC3LQ5T215 181 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 SLC51AQ86UW1 340 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 ZNF274Q96GC6 653 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 FAM84BQ96KN1 310 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 TACC3Q9Y6A5 838 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 NEDD4P46934 1319 aa10.04□□□□□ -0.8
CNOT2-208ENST00000548021 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
CNOT2-208ENST00000548021 RGPD3A6NKT7 1758 aaPredicted RBP10.03□□□□□ -0.8
CNOT2-208ENST00000548021 RGPD4Q7Z3J3 1758 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
CNOT2-208ENST00000548021 GSG1L2A8MUP6 293 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
CNOT2-208ENST00000548021 MCM5P33992 734 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 CYB5R4Q7L1T6 521 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
CNOT2-208ENST00000548021 FERMT3Q86UX7 667 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 IFNL3Q8IZI9 196 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
CNOT2-208ENST00000548021 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
CNOT2-208ENST00000548021 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.8
CNOT2-208ENST00000548021 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
CNOT2-208ENST00000548021 PATL2C9JE40 543 aaKnown RBP10.02□□□□□ -0.81
CNOT2-208ENST00000548021 SH2B2O14492 632 aaPredicted RBP10.02□□□□□ -0.81
CNOT2-208ENST00000548021 PRKAB2O43741 272 aa10.02□□□□□ -0.81
CNOT2-208ENST00000548021 GYS1P13807 737 aa10.02□□□□□ -0.81
CNOT2-208ENST00000548021 CYP7A1P22680 504 aa10.02□□□□□ -0.81
CNOT2-208ENST00000548021 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.81
CNOT2-208ENST00000548021 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.81
CNOT2-208ENST00000548021 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms