RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PRMT6Q96LA8 375 aaPredicted RBP23.47■■□□□ 1.35
DDX55-211ENST00000544429 MAST3O60307 1309 aa23.46■■□□□ 1.35
DDX55-211ENST00000544429 APLP1P51693 650 aa23.46■■□□□ 1.35
DDX55-211ENST00000544429 AOX1Q06278 1338 aa23.46■■□□□ 1.35
DDX55-211ENST00000544429 DLGAP5Q15398 846 aa23.46■■□□□ 1.35
DDX55-211ENST00000544429 CEP350Q5VT06 3117 aa23.46■■□□□ 1.35
DDX55-211ENST00000544429 ANGEL2Q5VTE6 544 aaKnown RBP23.46■■□□□ 1.35
DDX55-211ENST00000544429 ZGPATQ8N5A5 531 aaKnown RBP23.46■■□□□ 1.35
DDX55-211ENST00000544429 GLIS2Q9BZE0 524 aaPredicted RBP23.46■■□□□ 1.35
DDX55-211ENST00000544429 MYO5AQ9Y4I1 1855 aaKnown RBP23.46■■□□□ 1.35
DDX55-211ENST00000544429 MYH2Q9UKX2 1941 aa23.45■■□□□ 1.35
DDX55-211ENST00000544429 TRAF5O00463 557 aa23.45■■□□□ 1.34
DDX55-211ENST00000544429 CRKP46108 304 aa23.45■■□□□ 1.34
DDX55-211ENST00000544429 TTC39AQ5SRH9 613 aa23.45■■□□□ 1.34
DDX55-211ENST00000544429 HHIPL2Q6UWX4 724 aa23.45■■□□□ 1.34
DDX55-211ENST00000544429 DCPSQ96C86 337 aaKnown RBP23.45■■□□□ 1.34
DDX55-211ENST00000544429 FMR1Q06787 632 aaKnown RBP eCLIP23.44■■□□□ 1.34
DDX55-211ENST00000544429 KRT26Q7Z3Y9 468 aa23.44■■□□□ 1.34
DDX55-211ENST00000544429 ZDHHC15Q96MV8 337 aa23.44■■□□□ 1.34
DDX55-211ENST00000544429 DOCK2Q92608 1830 aa23.44■■□□□ 1.34
DDX55-211ENST00000544429 LDHBP07195 334 aaKnown RBP23.43■■□□□ 1.34
DDX55-211ENST00000544429 TEKT1Q969V4 418 aa23.43■■□□□ 1.34
DDX55-211ENST00000544429 MAST2Q6P0Q8 1798 aa23.42■■□□□ 1.34
DDX55-211ENST00000544429 SMARCA5O60264 1052 aaPredicted RBP23.42■■□□□ 1.34
DDX55-211ENST00000544429 CST9Q5W186 159 aa23.42■■□□□ 1.34
DDX55-211ENST00000544429 APOBEC3HQ6NTF7 200 aaKnown RBP23.42■■□□□ 1.34
DDX55-211ENST00000544429 USP48Q86UV5 1035 aa23.42■■□□□ 1.34
DDX55-211ENST00000544429 ZNF384Q8TF68 577 aa23.42■■□□□ 1.34
DDX55-211ENST00000544429 ADM5C9JUS6 153 aa23.41■■□□□ 1.34
DDX55-211ENST00000544429 CYP2E1P05181 493 aaPredicted RBP23.41■■□□□ 1.34
DDX55-211ENST00000544429 IFIT2P09913 472 aaKnown RBP23.41■■□□□ 1.34
DDX55-211ENST00000544429 SPDYE2Q495Y8 402 aa23.41■■□□□ 1.34
DDX55-211ENST00000544429 DLK2Q6UY11 383 aa23.41■■□□□ 1.34
DDX55-211ENST00000544429 SULF1Q8IWU6 871 aa23.41■■□□□ 1.34
DDX55-211ENST00000544429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.41■■□□□ 1.34
DDX55-211ENST00000544429 GAKO14976 1311 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 IGSF3O75054 1194 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
DDX55-211ENST00000544429 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 SPTY2D1Q68D10 685 aaPredicted RBP23.4■■□□□ 1.34
DDX55-211ENST00000544429 TBC1D9Q6ZT07 1266 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 APOBEC3FQ8IUX4 373 aaKnown RBP23.4■■□□□ 1.34
DDX55-211ENST00000544429 GCC1Q96CN9 775 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 FAM163AQ96GL9 167 aaPredicted RBP23.4■■□□□ 1.34
DDX55-211ENST00000544429 SNRKQ9NRH2 765 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 ABCF2Q9UG63 623 aa23.4■■□□□ 1.34
DDX55-211ENST00000544429 ZAP70P43403 619 aa23.39■■□□□ 1.33
DDX55-211ENST00000544429 RBM5P52756 815 aaKnown RBP eCLIP23.39■■□□□ 1.334e-6■■□□□ 12.4
DDX55-211ENST00000544429 SMC5Q8IY18 1101 aa23.39■■□□□ 1.33
DDX55-211ENST00000544429 CREBZFQ9NS37 354 aa23.39■■□□□ 1.33
DDX55-211ENST00000544429 DAGLAQ9Y4D2 1042 aa23.39■■□□□ 1.33
DDX55-211ENST00000544429 TMEM88BA6NKF7 163 aa23.38■■□□□ 1.33
DDX55-211ENST00000544429 MYO1BO43795 1136 aa23.38■■□□□ 1.33
DDX55-211ENST00000544429 IGHDP01880 384 aa23.38■■□□□ 1.33
DDX55-211ENST00000544429 MECOMQ03112 1051 aa23.38■■□□□ 1.33
DDX55-211ENST00000544429 ERICH6Q7L0X2 663 aa23.38■■□□□ 1.33
DDX55-211ENST00000544429 NSUN4Q96CB9 384 aaKnown RBP23.38■■□□□ 1.33
DDX55-211ENST00000544429 ZNF70Q9UC06 446 aaPredicted RBP23.38■■□□□ 1.33
DDX55-211ENST00000544429 ATP5JP18859 108 aa23.37■■□□□ 1.33
DDX55-211ENST00000544429 TDRD3Q9H7E2 651 aaKnown RBP23.37■■□□□ 1.33
DDX55-211ENST00000544429 SCAF8Q9UPN6 1271 aaKnown RBP23.37■■□□□ 1.33
DDX55-211ENST00000544429 CLRN2A0PK11 232 aa23.36■■□□□ 1.33
DDX55-211ENST00000544429 CDCA5Q96FF9 252 aa23.36■■□□□ 1.33
DDX55-211ENST00000544429 RWDD1Q9H446 243 aaPredicted RBP23.36■■□□□ 1.33
DDX55-211ENST00000544429 PIH1D3Q9NQM4 214 aaKnown RBP23.36■■□□□ 1.33
DDX55-211ENST00000544429 SALL3Q9BXA9 1300 aa23.35■■□□□ 1.33
DDX55-211ENST00000544429 HTRA3P83110 453 aa23.35■■□□□ 1.33
DDX55-211ENST00000544429 FKBP1CQ5VVH2 108 aa23.35■■□□□ 1.33
DDX55-211ENST00000544429 DZIP1Q86YF9 867 aaKnown RBP23.35■■□□□ 1.33
DDX55-211ENST00000544429 DNAJC5GQ8N7S2 189 aa23.35■■□□□ 1.33
DDX55-211ENST00000544429 PPP2R3BQ9Y5P8 575 aa23.35■■□□□ 1.33
DDX55-211ENST00000544429 CELF2O95319 508 aaKnown RBP23.34■■□□□ 1.33
DDX55-211ENST00000544429 DEFB129Q9H1M3 183 aa23.34■■□□□ 1.33
DDX55-211ENST00000544429 ANTXR1Q9H6X2 564 aa23.34■■□□□ 1.33
DDX55-211ENST00000544429 NDUFB9Q9Y6M9 179 aa23.34■■□□□ 1.33
DDX55-211ENST00000544429 MROH7-TTC4A0A0A0MT08 1334 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 CNTNAP1P78357 1384 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 RFX7Q2KHR2 1363 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 CDC42EP5Q6NZY7 148 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 SLF2Q8IX21 1173 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 ECHDC1Q9NTX5 307 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 LRP2BPQ9P2M1 347 aa23.33■■□□□ 1.33
DDX55-211ENST00000544429 PAPPA2Q9BXP8 1791 aa23.32■■□□□ 1.32
DDX55-211ENST00000544429 GPR75-ASB3A0A0A6YYF3 556 aa23.32■■□□□ 1.32
DDX55-211ENST00000544429 HAUS7Q99871 368 aa23.32■■□□□ 1.32
DDX55-211ENST00000544429 RAI14Q9P0K7 980 aa23.32■■□□□ 1.32
DDX55-211ENST00000544429 SSC5DA1L4H1 1573 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 TNFAIP1Q13829 316 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 RASA3Q14644 834 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 TMED8Q6PL24 325 aaPredicted RBP23.31■■□□□ 1.32
DDX55-211ENST00000544429 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 VEZTQ9HBM0 779 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 TLL2Q9Y6L7 1015 aa23.31■■□□□ 1.32
DDX55-211ENST00000544429 MYH7P12883 1935 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 RASSF10A6NK89 507 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 GSTO1P78417 241 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 ANKRD45Q5TZF3 282 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 PRAMEF18Q5VWM3 479 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 SAPCD2Q86UD0 394 aa23.3■■□□□ 1.32
DDX55-211ENST00000544429 FAM83AQ86UY5 434 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms