RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 TMED8Q6PL24 325 aaPredicted RBP9.11□□□□□ -0.95
LRP6-206ENST00000543091 RAD17O75943 681 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 RNF181Q9P0P0 153 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 ZNF76P36508 570 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 EPHA10Q5JZY3 1008 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 ONECUT3O60422 494 aaPredicted RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 TXLNAP40222 546 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 OTUD7AQ8TE49 926 aaPredicted RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 MPHOSPH6Q99547 160 aaKnown RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 DBNLQ9UJU6 430 aaKnown RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 ATP6V0A2Q9Y487 856 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 SETD1AO15047 1707 aaKnown RBP9.1□□□□□ -0.95
LRP6-206ENST00000543091 BCL9LQ86UU0 1499 aa9.1□□□□□ -0.95
LRP6-206ENST00000543091 CALM1P0DP23 149 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 CALM2P0DP24 149 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 CALM3P0DP25 149 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 PDE6AP16499 860 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 LARP1BQ659C4 914 aaKnown RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 LIMCH1Q9UPQ0 1083 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 TOPAZ1Q8N9V7 1692 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 ADORA1P30542 326 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 SCNN1DP51172 638 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 CCDC73Q6ZRK6 1079 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 PIBF1Q8WXW3 757 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 SAP30BPQ9UHR5 308 aaKnown RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 CSADQ9Y600 493 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 STRCQ7RTU9 1775 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 PXDNLA1KZ92 1463 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 PTMAP06454 111 aaKnown RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 UBE3CQ15386 1083 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 RABL6Q3YEC7 729 aaPredicted RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 ARPP21Q9UBL0 812 aaPredicted RBP9.09□□□□□ -0.95
LRP6-206ENST00000543091 RGS12O14924 1447 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 DPEP1P16444 411 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 SKAP1Q86WV1 359 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 MAPKAPK5Q8IW41 473 aa9.09□□□□□ -0.95
LRP6-206ENST00000543091 RTL9Q8NET4 1388 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
LRP6-206ENST00000543091 TGFBRAP1Q8WUH2 860 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 TMOD4Q9NZQ9 345 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 RBM27Q9P2N5 1060 aaKnown RBP9.08□□□□□ -0.96
LRP6-206ENST00000543091 ZBTB43O43298 467 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 BTDP43251 543 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 METAP2P50579 478 aaKnown RBP eCLIP9.08□□□□□ -0.96
LRP6-206ENST00000543091 TCP10Q12799 353 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 SUPT20HL1Q3ZLR7 823 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 MICU3Q86XE3 530 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 FOXO4P98177 505 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 WDR33Q9C0J8 1336 aaKnown RBP9.08□□□□□ -0.96
LRP6-206ENST00000543091 IARSP41252 1262 aaKnown RBP9.08□□□□□ -0.96
LRP6-206ENST00000543091 STK38Q15208 465 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 BEGAINQ9BUH8 593 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 CD209Q9NNX6 404 aa9.08□□□□□ -0.96
LRP6-206ENST00000543091 LTN1O94822 1766 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 IQCA1LA6NCM1 817 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 CSF1RP07333 972 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 STAP2Q9UGK3 403 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 CD2APQ9Y5K6 639 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 B4DLN1 442 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 PRC1O43663 620 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 ECE2O60344 883 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 MRPL12P52815 198 aaKnown RBP9.07□□□□□ -0.96
LRP6-206ENST00000543091 ZNF277Q9NRM2 450 aaPredicted RBP9.07□□□□□ -0.96
LRP6-206ENST00000543091 KLF18A0A0U1RQI7 1052 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 GPSM2P81274 684 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 RAB3GAP1Q15042 981 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.07□□□□□ -0.96
LRP6-206ENST00000543091 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
LRP6-206ENST00000543091 IGSF3O75054 1194 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 AOC3Q16853 763 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 NDUFB9Q9Y6M9 179 aa9.07□□□□□ -0.96
LRP6-206ENST00000543091 SASH1O94885 1247 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
LRP6-206ENST00000543091 CCDC83Q8IWF9 413 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 CCDC82Q8N4S0 544 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 BRF1Q92994 677 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 AS3MTQ9HBK9 375 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 VAT1LQ9HCJ6 419 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 ATP8A2Q9NTI2 1148 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 ZNRF3Q9ULT6 936 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 SGSM2O43147 1006 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 RTN1Q16799 776 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 DDX11Q96FC9 970 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 C8orf76Q96K31 380 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 TCP10L2B9ZVM9 353 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
LRP6-206ENST00000543091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.06□□□□□ -0.96
LRP6-206ENST00000543091 EPB41L2O43491 1005 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms