RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GPATCH3Q96I76 525 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 SERPINA10Q9UK55 444 aa20.88■□□□□ 0.93
RABGGTA-203ENST00000543002 DLGAP5Q15398 846 aa20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 OTUD7AQ8TE49 926 aaPredicted RBP20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 ZC3H15Q8WU90 426 aaKnown RBP20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 ZBED3Q96IU2 234 aaPredicted RBP20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 LNPKQ9C0E8 428 aa20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 PGAP2Q9UHJ9 254 aa20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 CLEC11AQ9Y240 323 aa20.87■□□□□ 0.93
RABGGTA-203ENST00000543002 WNT10BO00744 389 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 CRKP46108 304 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 CFAP100Q494V2 611 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 CHADLQ6NUI6 762 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 ERICH6Q7L0X2 663 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 BOLA2Q9H3K6 86 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 SALL3Q9BXA9 1300 aa20.86■□□□□ 0.93
RABGGTA-203ENST00000543002 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 SMC1BQ8NDV3 1235 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 HAUS7Q99871 368 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 NDUFB9Q9Y6M9 179 aa20.85■□□□□ 0.93
RABGGTA-203ENST00000543002 SPDYE2BA6NHP3 402 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 IGSF3O75054 1194 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 SPDYE6P0CI01 402 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 MX1P20591 662 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 RBM5P52756 815 aaKnown RBP eCLIP20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 NBPF9Q3BBW0 867 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 HHIPL2Q6UWX4 724 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 DZIP1Q86YF9 867 aaKnown RBP20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 PIH1D3Q9NQM4 214 aaKnown RBP20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 PCDHAC2Q9Y5I4 1007 aa20.84■□□□□ 0.93
RABGGTA-203ENST00000543002 MECOMQ03112 1051 aa20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 TSHZ3Q63HK5 1081 aa20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 PRMT6Q96LA8 375 aaPredicted RBP20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 ZDHHC15Q96MV8 337 aa20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 DNAJC2Q99543 621 aaKnown RBP20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 ANTXR1Q9H6X2 564 aa20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 RAI14Q9P0K7 980 aa20.83■□□□□ 0.93
RABGGTA-203ENST00000543002 ASTN2O75129 1339 aaPredicted RBP20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 ERC2O15083 957 aa20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 FSTL1Q12841 308 aa20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 TTF1Q15361 905 aaPredicted RBP20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 DIXDC1Q155Q3 683 aa20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 MAP1SQ66K74 1059 aaPredicted RBP20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 SLF2Q8IX21 1173 aa20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 STAP2Q9UGK3 403 aa20.82■□□□□ 0.92
RABGGTA-203ENST00000543002 GOLIM4O00461 696 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 PDE1AP54750 535 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 CENPQQ7L2Z9 268 aaPredicted RBP20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 PI4K2BQ8TCG2 481 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 ZNF384Q8TF68 577 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 NSUN4Q96CB9 384 aaKnown RBP20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 FAM163AQ96GL9 167 aaPredicted RBP20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 PAG1Q9NWQ8 432 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 GGA3Q9NZ52 723 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 DAGLAQ9Y4D2 1042 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
RABGGTA-203ENST00000543002 MYO1BO43795 1136 aa20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 GSTO1P78417 241 aa20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 ANGEL2Q5VTE6 544 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 APOBEC3HQ6NTF7 200 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 CNTROBQ8N137 903 aa20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 DCPSQ96C86 337 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 EDC3Q96F86 508 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 GAKO14976 1311 aa20.8■□□□□ 0.92
RABGGTA-203ENST00000543002 IDH1O75874 414 aaKnown RBP20.79■□□□□ 0.92
RABGGTA-203ENST00000543002 LDHCP07864 332 aa20.79■□□□□ 0.92
RABGGTA-203ENST00000543002 AOX1Q06278 1338 aa20.79■□□□□ 0.92
RABGGTA-203ENST00000543002 ITGBL1O95965 494 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 MAP3K12Q12852 859 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 CDC37L1Q7L3B6 337 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 TDRD3Q9H7E2 651 aaKnown RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 TMED8Q6PL24 325 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 SULF1Q8IWU6 871 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 GLIS2Q9BZE0 524 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 OSBPL3Q9H4L5 887 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 MYO5AQ9Y4I1 1855 aaKnown RBP20.78■□□□□ 0.92
RABGGTA-203ENST00000543002 DOCK2Q92608 1830 aa20.77■□□□□ 0.92
RABGGTA-203ENST00000543002 MYH2Q9UKX2 1941 aa20.77■□□□□ 0.92
RABGGTA-203ENST00000543002 CLRN2A0PK11 232 aa20.77■□□□□ 0.91
RABGGTA-203ENST00000543002 PDE4AP27815 886 aa20.77■□□□□ 0.91
RABGGTA-203ENST00000543002 APOBEC3FQ8IUX4 373 aaKnown RBP20.77■□□□□ 0.91
RABGGTA-203ENST00000543002 MAST2Q6P0Q8 1798 aa20.76■□□□□ 0.91
RABGGTA-203ENST00000543002 ECM29Q5VYK3 1845 aa20.76■□□□□ 0.91
RABGGTA-203ENST00000543002 GPR75-ASB3A0A0A6YYF3 556 aa20.76■□□□□ 0.91
RABGGTA-203ENST00000543002 C1QTNF8P60827 252 aa20.76■□□□□ 0.91
RABGGTA-203ENST00000543002 USP48Q86UV5 1035 aa20.76■□□□□ 0.91
RABGGTA-203ENST00000543002 POLR2AP24928 1970 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms