RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PYM1Q9BRP8 204 aaKnown RBP9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 CACTINQ8WUQ7 758 aaKnown RBP9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 KRT18P05783 430 aaKnown RBP9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 SPAG1Q07617 926 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 MTX1Q13505 466 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 RCOR1Q9UKL0 485 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 PCDHA7Q9UN72 937 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 ZNF652Q9Y2D9 606 aa9.38□□□□□ -0.91
PRKAB1-207ENST00000542698 PRAMEF22A3QJZ6 481 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 CYP7A1P22680 504 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 MCM3P25205 808 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 LMAN1P49257 510 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 STX17P56962 302 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 FKBP15Q5T1M5 1219 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 EXOC5O00471 708 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 KARSQ15046 597 aaKnown RBP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 RRAGBQ5VZM2 374 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 ARHGEF40Q8TER5 1519 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 ZHX3Q9H4I2 956 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 LZTFL1Q9NQ48 299 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 ALKQ9UM73 1620 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 USP5P45974 858 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 KRT40Q6A162 431 aa9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 CDC5LQ99459 802 aaKnown RBP9.37□□□□□ -0.91
PRKAB1-207ENST00000542698 ATP10DQ9P241 1426 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 KIF5BP33176 963 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 ZAP70P43403 619 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 IFIT1BQ5T764 474 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 MAGEB6Q8N7X4 407 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 FBXO18Q8NFZ0 1043 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 PHKBQ93100 1093 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CTAGE15A4D2H0 777 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 USO1O60763 962 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CUTAO60888 179 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CTAGE8P0CG41 777 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 EVCP57679 992 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CTAGE6Q86UF2 777 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CTAGE4Q8IX94 777 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 TCP11L1Q9NUJ3 509 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 NLRP1Q9C000 1473 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 POLR2DO15514 142 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 ARHGAP6O43182 974 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 IL2RBP14784 551 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 GNAT2P19087 354 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 MTIF2P46199 727 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 ATP2B2Q01814 1243 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 NSUN7Q8NE18 718 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CARD6Q9BX69 1037 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 CABP5Q9NP86 173 aa9.36□□□□□ -0.91
PRKAB1-207ENST00000542698 FGAP02671 866 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 SPECC1Q5M775 1068 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ARHGEF25Q86VW2 580 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 DIS3L2Q8IYB7 885 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 CEP112Q8N8E3 955 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 MLKLQ8NB16 471 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ZKSCAN3Q9BRR0 538 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 TSPYL1Q9H0U9 437 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ZNF287Q9HBT7 754 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 NFE2L3Q9Y4A8 694 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 PTPRMP28827 1452 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ADCY9O60503 1353 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 CTAGE9A4FU28 777 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 PHKG2P15735 406 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 CMA1P23946 247 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 NDUFA8P51970 172 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 CCDC152Q4G0S7 254 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 GOLGA6L10A6NI86 522 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 AKR1B15C9JRZ8 316 aaPredicted RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 PFKFB1P16118 471 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 ITGA6P23229 1130 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 PDE4BQ07343 736 aa9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 DZIP1Q86YF9 867 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRKAB1-207ENST00000542698 MBD4O95243 580 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 TUBB4BP68371 445 aa9.34□□□□□ -0.91
PRKAB1-207ENST00000542698 PTPN12Q05209 780 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms