RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 GRIK5Q16478 980 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 ERICH6Q7L0X2 663 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 KIAA0825Q8IV33 1275 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 GMLQ99445 158 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 PIH1D3Q9NQM4 214 aaKnown RBP14.08□□□□□ -0.16
YBX3-213ENST00000542641 RAI14Q9P0K7 980 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 SUGT1Q9Y2Z0 365 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 SCN9AQ15858 1988 aa14.08□□□□□ -0.16
YBX3-213ENST00000542641 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
YBX3-213ENST00000542641 USP17L8P0C7I0 530 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 PRDX5P30044 214 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 TTC22Q5TAA0 569 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 DPF2Q92785 391 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 TTF2Q9UNY4 1162 aaKnown RBP14.07□□□□□ -0.16
YBX3-213ENST00000542641 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
YBX3-213ENST00000542641 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
YBX3-213ENST00000542641 DZIP1Q86YF9 867 aaKnown RBP14.06□□□□□ -0.16
YBX3-213ENST00000542641 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
YBX3-213ENST00000542641 RILPL2Q969X0 211 aa14.06□□□□□ -0.16
YBX3-213ENST00000542641 EVI5LQ96CN4 794 aa14.06□□□□□ -0.16
YBX3-213ENST00000542641 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 GSPT1P15170 499 aaKnown RBP14.05□□□□□ -0.16
YBX3-213ENST00000542641 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
YBX3-213ENST00000542641 SCNN1DP51172 638 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 MECOMQ03112 1051 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
YBX3-213ENST00000542641 GPRC5DQ9NZD1 345 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 CNOT7Q9UIV1 285 aaKnown RBP14.05□□□□□ -0.16
YBX3-213ENST00000542641 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 AKAP11Q9UKA4 1901 aa14.05□□□□□ -0.16
YBX3-213ENST00000542641 H7C1D1 291 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 IGSF3O75054 1194 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 MMP14P50281 582 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 SLC9C2Q5TAH2 1124 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 NSUN4Q96CB9 384 aaKnown RBP14.04□□□□□ -0.16
YBX3-213ENST00000542641 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
YBX3-213ENST00000542641 FSD1Q9BTV5 496 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 MAST3O60307 1309 aa14.04□□□□□ -0.16
YBX3-213ENST00000542641 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 SDSP20132 328 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 EPS15P42566 896 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 RBM5P52756 815 aaKnown RBP eCLIP14.03□□□□□ -0.16
YBX3-213ENST00000542641 ZNF280AP59817 542 aaPredicted RBP14.03□□□□□ -0.16
YBX3-213ENST00000542641 GSTO1P78417 241 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 LRRFIP1Q32MZ4 808 aaKnown RBP14.03□□□□□ -0.16
YBX3-213ENST00000542641 NAA16Q6N069 864 aaPredicted RBP14.03□□□□□ -0.16
YBX3-213ENST00000542641 ZSCAN25Q6NSZ9 544 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 SLF2Q8IX21 1173 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 MAGEB6Q8N7X4 407 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 TEKT1Q969V4 418 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 SERPINA10Q9UK55 444 aa14.03□□□□□ -0.16
YBX3-213ENST00000542641 PSME4Q14997 1843 aa14.02□□□□□ -0.16
YBX3-213ENST00000542641 SHTN1A0MZ66 631 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 LDHCP07864 332 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 CRKP46108 304 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.17
YBX3-213ENST00000542641 BMP2KLQ5H9B9 411 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 RBM26Q5T8P6 1007 aaKnown RBP14.02□□□□□ -0.17
YBX3-213ENST00000542641 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.17
YBX3-213ENST00000542641 MRIQ9BWK5 157 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 MYOZ2Q9NPC6 264 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
YBX3-213ENST00000542641 ZNF532Q9HCE3 1301 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 IQCA1LA6NCM1 817 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 ZFYP08048 801 aaPredicted RBP14.01□□□□□ -0.17
YBX3-213ENST00000542641 PDE6AP16499 860 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 CYP7A1P22680 504 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 ADD2P35612 726 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 DLGAP5Q15398 846 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 CFAP100Q494V2 611 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 TMED8Q6PL24 325 aaPredicted RBP14.01□□□□□ -0.17
YBX3-213ENST00000542641 HHIPL2Q6UWX4 724 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 TICAM2Q86XR7 235 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
YBX3-213ENST00000542641 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
YBX3-213ENST00000542641 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
YBX3-213ENST00000542641 EPHX2P34913 555 aa14□□□□□ -0.17
YBX3-213ENST00000542641 UBE3CQ15386 1083 aa14□□□□□ -0.17
YBX3-213ENST00000542641 TBC1D10BQ4KMP7 808 aaPredicted RBP14□□□□□ -0.17
YBX3-213ENST00000542641 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
YBX3-213ENST00000542641 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
YBX3-213ENST00000542641 ZDHHC15Q96MV8 337 aa14□□□□□ -0.17
YBX3-213ENST00000542641 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
YBX3-213ENST00000542641 ADARB2Q9NS39 739 aaKnown RBP14□□□□□ -0.17
YBX3-213ENST00000542641 MROH7-TTC4A0A0A0MT08 1334 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 POTECB2RU33 542 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 HIP1O00291 1037 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 EGFRP00533 1210 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 CHGBP05060 677 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
YBX3-213ENST00000542641 YY1P25490 414 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 KIF4BQ2VIQ3 1234 aa13.99□□□□□ -0.17
YBX3-213ENST00000542641 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms