RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 CUTAO60888 179 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 GNAT2P19087 354 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 CEP128Q6ZU80 1094 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 KIAA1524Q8TCG1 905 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 CRNKL1Q9BZJ0 848 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 FERP16591 822 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 MRFAP1L1Q96HT8 127 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 MYCBPQ99417 103 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 WHAMMP3Q1A5X7 153 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 CCDC51Q96ER9 411 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 UBLCP1Q8WVY7 318 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 TSKSQ9UJT2 592 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 PPFIA4O75335 1185 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 CALCOCO2Q13137 446 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 NKIRAS1Q9NYS0 192 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 MTUS1Q9ULD2 1270 aa16.85■□□□□ 0.29
SMARCA4-207ENST00000541122 BUB1BO60566 1050 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 CACNA2D3Q8IZS8 1091 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 SLC27A2O14975 620 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 BAG3O95817 575 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 PAK2Q13177 524 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 TMOD2Q9NZR1 351 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 KCNH3Q9ULD8 1083 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 GBP1P32455 592 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
SMARCA4-207ENST00000541122 FERMT2Q96AC1 680 aa16.83■□□□□ 0.29
SMARCA4-207ENST00000541122 WDR62O43379 1518 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 TLDC2A0PJX2 215 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 STMN2Q93045 179 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 CABS1Q96KC9 395 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 MED4Q9NPJ6 270 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 CCDC160A6NGH7 325 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 TSNAXIP1Q2TAA8 658 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 SYNRGQ9UMZ2 1314 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 ATP5J2-PTCD1G3V325 749 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 MTMR3Q13615 1198 aa16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 SECISBP2LQ93073 1101 aaKnown RBP16.83■□□□□ 0.28
SMARCA4-207ENST00000541122 ZC3H6P61129 1189 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 IDI1Q13907 227 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 ZBTB3Q9H5J0 574 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 PSDA5PKW4 1024 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 CDC25BP30305 580 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 SLC4A4Q9Y6R1 1079 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 TRAF1Q13077 416 aa16.82■□□□□ 0.28
SMARCA4-207ENST00000541122 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 ETF1P62495 437 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 ZNF202O95125 648 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 HPDP32754 393 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 PCK1P35558 622 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 C6orf50Q9HD87 102 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 KCNK9Q9NPC2 374 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 SEPT6Q14141 434 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 DTHD1Q6ZMT9 781 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 CFAP57Q96MR6 1250 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 CLUL1Q15846 466 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 NOX5Q96PH1 765 aa16.81■□□□□ 0.28
SMARCA4-207ENST00000541122 SLC9C2Q5TAH2 1124 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 FAM71BQ8TC56 605 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 POGZQ7Z3K3 1410 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 TBC1D8BQ0IIM8 1120 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 GOLGA8KD6RF30 607 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 CPA1P15085 419 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 PLCD1P51178 756 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 FCHSD1Q86WN1 690 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 CARD14Q9BXL6 1004 aa16.8■□□□□ 0.28
SMARCA4-207ENST00000541122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.282e-8■■■□□ 16.1
SMARCA4-207ENST00000541122 CIB2O75838 187 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms