RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 ZC3H12BQ5HYM0 836 aaKnown RBP12.1□□□□□ -0.47
LRP6-205ENST00000540527 GET4Q7L5D6 327 aaPredicted RBP12.1□□□□□ -0.47
LRP6-205ENST00000540527 PPHLN1Q8NEY8 458 aaKnown RBP12.1□□□□□ -0.47
LRP6-205ENST00000540527 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 ERP27Q96DN0 273 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 TRMT2BQ96GJ1 504 aaKnown RBP12.1□□□□□ -0.47
LRP6-205ENST00000540527 NGLY1Q96IV0 654 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 PRR14Q9BWN1 585 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 ANO9A1A5B4 782 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 HALP42357 657 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 ITKQ08881 620 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 HYIQ5T013 277 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
LRP6-205ENST00000540527 ABLIM3O94929 683 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 MMP16P51512 607 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 CLCN6P51797 869 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 SNAP47Q5SQN1 464 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 ZNF354CQ86Y25 554 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 CREBRFQ8IUR6 639 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 C3orf58Q8NDZ4 430 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 ATXN2LQ8WWM7 1075 aaKnown RBP12.08□□□□□ -0.48
LRP6-205ENST00000540527 ELAC2Q9BQ52 826 aaKnown RBP12.08□□□□□ -0.48
LRP6-205ENST00000540527 YIPF4Q9BSR8 244 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 SUV39H2Q9H5I1 410 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 RABGAP1Q9Y3P9 1069 aa12.08□□□□□ -0.48
LRP6-205ENST00000540527 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 POTEB3A0JP26 581 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
LRP6-205ENST00000540527 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
LRP6-205ENST00000540527 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
LRP6-205ENST00000540527 LMNB2Q03252 620 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
LRP6-205ENST00000540527 POTEBQ6S5H4 581 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 TREML1Q86YW5 311 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 GOLM1Q8NBJ4 401 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
LRP6-205ENST00000540527 RHOBTB2Q9BYZ6 727 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 MAP4K5Q9Y4K4 846 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
LRP6-205ENST00000540527 HIP1RO75146 1068 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 PF4P02776 101 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 FAM153BP0C7A2 387 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 PHKG2P15735 406 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 EPB42P16452 691 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 KRT72Q14CN4 511 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 RNF219Q5W0B1 726 aaPredicted RBP12.06□□□□□ -0.48
LRP6-205ENST00000540527 XKR5Q6UX68 686 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 TOGARAM2Q6ZUX3 1019 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
LRP6-205ENST00000540527 KRT77Q7Z794 578 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 JPH3Q8WXH2 748 aaPredicted RBP12.06□□□□□ -0.48
LRP6-205ENST00000540527 SKA1Q96BD8 255 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 MPP4Q96JB8 637 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 FERD3LQ96RJ6 166 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 RUSC1Q9BVN2 902 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
LRP6-205ENST00000540527 C1QTNF2Q9BXJ5 285 aa12.06□□□□□ -0.48
LRP6-205ENST00000540527 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 DDAH1O94760 285 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 MICAL2O94851 1124 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 TYRP1P17643 537 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 GRM2Q14416 872 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
LRP6-205ENST00000540527 MMS22LQ6ZRQ5 1243 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 STRA8Q7Z7C7 330 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 ALDH16A1Q8IZ83 802 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 KIF2CQ99661 725 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 KLK14Q9P0G3 267 aa12.05□□□□□ -0.48
LRP6-205ENST00000540527 EML1O00423 815 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 ZSCAN20P17040 1043 aaPredicted RBP12.04□□□□□ -0.48
LRP6-205ENST00000540527 SERPINB3P29508 390 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 SMTNP53814 917 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 CAMK2GQ13555 558 aaPredicted RBP12.04□□□□□ -0.48
LRP6-205ENST00000540527 AGERQ15109 404 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
LRP6-205ENST00000540527 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
LRP6-205ENST00000540527 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms