RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CEMIPQ8WUJ3 1361 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 GNRH1P01148 92 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 OSBPP22059 807 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
GNE-205ENST00000539815 MXD3Q9BW11 206 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 MYPNQ86TC9 1320 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 TM4SF4P48230 202 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 TRIM28Q13263 835 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 NEUROD6Q96NK8 337 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 MYBBP1AQ9BQG0 1328 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 SPTY2D1Q68D10 685 aaPredicted RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 AMOTL1Q8IY63 956 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 PHAXQ9H814 394 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 IFT57Q9NWB7 429 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 ASTN2O75129 1339 aaPredicted RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 CWF19L2Q2TBE0 894 aaKnown RBP9.37□□□□□ -0.91
GNE-205ENST00000539815 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 LINS1Q8NG48 757 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 ITGB4P16144 1822 aa9.37□□□□□ -0.91
GNE-205ENST00000539815 EGFRP00533 1210 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 ZNF280AP59817 542 aaPredicted RBP9.36□□□□□ -0.91
GNE-205ENST00000539815 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 WDR66Q8TBY9 1149 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 ADCY3O60266 1144 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
GNE-205ENST00000539815 PICALMQ13492 652 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 RAI14Q9P0K7 980 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 DEFB118Q96PH6 123 aa9.36□□□□□ -0.91
GNE-205ENST00000539815 ZMYND8Q9ULU4 1186 aaPredicted RBP9.36□□□□□ -0.91
GNE-205ENST00000539815 H0YGN5 161 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 CNPY4Q8N129 248 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 PRDM5Q9NQX1 630 aaPredicted RBP9.35□□□□□ -0.91
GNE-205ENST00000539815 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 MRC1P22897 1456 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
GNE-205ENST00000539815 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.35□□□□□ -0.91
GNE-205ENST00000539815 AS3MTQ9HBK9 375 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 SLC5A4Q9NY91 659 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
GNE-205ENST00000539815 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 CHL1O00533 1208 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 CRKP46108 304 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 CCNA1P78396 465 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 FLIIQ13045 1269 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 C7orf61Q8IZ16 206 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 ZNF70Q9UC06 446 aaPredicted RBP9.35□□□□□ -0.91
GNE-205ENST00000539815 ZHX2Q9Y6X8 837 aa9.35□□□□□ -0.91
GNE-205ENST00000539815 DACT2Q5SW24 774 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 HMX1Q9NP08 348 aaPredicted RBP9.34□□□□□ -0.91
GNE-205ENST00000539815 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 UNCXA6NJT0 531 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 DZIP1LQ8IYY4 767 aaKnown RBP9.34□□□□□ -0.91
GNE-205ENST00000539815 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 PAGR1Q9BTK6 254 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
GNE-205ENST00000539815 LRP2BPQ9P2M1 347 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 IRS2Q9Y4H2 1338 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 MYH14Q7Z406 1995 aaKnown RBP9.34□□□□□ -0.91
GNE-205ENST00000539815 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 HLA-DOAP06340 250 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 UBE4AQ14139 1066 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 CABP5Q9NP86 173 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 FZD1Q9UP38 647 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 RIPOR2Q9Y4F9 1068 aa9.34□□□□□ -0.91
GNE-205ENST00000539815 KCNG1Q9UIX4 513 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 TRIM75PA6NK02 468 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
GNE-205ENST00000539815 GYG1P46976 350 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
GNE-205ENST00000539815 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
GNE-205ENST00000539815 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 SPDYE2BA6NHP3 402 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 SPDYE6P0CI01 402 aa9.33□□□□□ -0.92
GNE-205ENST00000539815 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
GNE-205ENST00000539815 PDHXO00330 501 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 SRRDQ9UH36 339 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 BAG3O95817 575 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 CCL5P13501 91 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 CACNB3P54284 484 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 GSTO1P78417 241 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 TSR2Q969E8 191 aaKnown RBP9.32□□□□□ -0.92
GNE-205ENST00000539815 MTIF3Q9H2K0 278 aaKnown RBP9.32□□□□□ -0.92
GNE-205ENST00000539815 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 TLR2O60603 784 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 GCKRQ14397 625 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms