RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
HMGA2-209ENST00000539662 IL1RAPL2Q9NP60 686 aa13.22□□□□□ -0.29
HMGA2-209ENST00000539662 HMG20BQ9P0W2 317 aa13.22□□□□□ -0.29
HMGA2-209ENST00000539662 DBNLQ9UJU6 430 aaKnown RBP13.22□□□□□ -0.29
HMGA2-209ENST00000539662 PCDHB15Q9Y5E8 787 aa13.22□□□□□ -0.29
HMGA2-209ENST00000539662 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
HMGA2-209ENST00000539662 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 MCAMP43121 646 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 CACNB3P54284 484 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 WDR66Q8TBY9 1149 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 ZNF384Q8TF68 577 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 TBC1D22AQ8WUA7 517 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
HMGA2-209ENST00000539662 DEFB115Q30KQ5 88 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
HMGA2-209ENST00000539662 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 GPR108Q9NPR9 543 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
HMGA2-209ENST00000539662 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
HMGA2-209ENST00000539662 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
HMGA2-209ENST00000539662 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
HMGA2-209ENST00000539662 MMP14P50281 582 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 GRM1Q13255 1194 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 GBA2Q9HCG7 927 aaPredicted RBP13.19□□□□□ -0.3
HMGA2-209ENST00000539662 MYH2Q9UKX2 1941 aa13.19□□□□□ -0.3
HMGA2-209ENST00000539662 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 SEMA3EO15041 775 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 ZBTB22O15209 634 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
HMGA2-209ENST00000539662 AOC2O75106 756 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 PRKG1Q13976 671 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 AACSQ86V21 672 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 TEKT1Q969V4 418 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
HMGA2-209ENST00000539662 WDR33Q9C0J8 1336 aaKnown RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 HMMRO75330 724 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 HUNKP57058 714 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 RASA3Q14644 834 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 NBPF12Q5TAG4 269 aaPredicted RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 HHIPL2Q6UWX4 724 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 CAPNS2Q96L46 248 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 SUGT1Q9Y2Z0 365 aa13.17□□□□□ -0.3
HMGA2-209ENST00000539662 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
HMGA2-209ENST00000539662 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
HMGA2-209ENST00000539662 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
HMGA2-209ENST00000539662 ZAP70P43403 619 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 MECOMQ03112 1051 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 MRIQ9BWK5 157 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 TMEM39BQ9GZU3 492 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
HMGA2-209ENST00000539662 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
HMGA2-209ENST00000539662 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
HMGA2-209ENST00000539662 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 MYO1BO43795 1136 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 NFIAQ12857 509 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 C2orf69Q8N8R5 385 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
HMGA2-209ENST00000539662 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
HMGA2-209ENST00000539662 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
HMGA2-209ENST00000539662 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
HMGA2-209ENST00000539662 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
HMGA2-209ENST00000539662 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
HMGA2-209ENST00000539662 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
HMGA2-209ENST00000539662 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
HMGA2-209ENST00000539662 GAKO14976 1311 aa13.13□□□□□ -0.31
HMGA2-209ENST00000539662 MAST3O60307 1309 aa13.13□□□□□ -0.31
HMGA2-209ENST00000539662 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
HMGA2-209ENST00000539662 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
HMGA2-209ENST00000539662 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms