RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 CACNA1AO00555 2505 aa8.65□□□□□ -1.02
LRTOMT-215ENST00000538478 MGAMO43451 1857 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 LACTBP83111 547 aaPredicted RBP8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 PROSER3Q2NL68 480 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 OTUD7BQ6GQQ9 843 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 U2AF1L4Q8WU68 220 aaKnown RBP8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 PODXL2Q9NZ53 605 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 DLG5Q8TDM6 1919 aa8.64□□□□□ -1.03
LRTOMT-215ENST00000538478 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 USP2O75604 605 aaPredicted RBP8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 UFL1O94874 794 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 ANXA1P04083 346 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 PPP4R3BQ5MIZ7 849 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 DACT2Q5SW24 774 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 ZNF454Q8N9F8 522 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 FAM122AQ96E09 287 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 FAM161BQ96MY7 647 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 DEFB129Q9H1M3 183 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 PCDHAC2Q9Y5I4 1007 aa8.63□□□□□ -1.03
LRTOMT-215ENST00000538478 AOX1Q06278 1338 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 POTEB3A0JP26 581 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 MAGEA10P43363 369 aaPredicted RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 EIF4A1P60842 406 aaKnown RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 POTEBQ6S5H4 581 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 TDHQ8IZJ6 230 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 TRIM47Q96LD4 638 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 RSPH6AQ9H0K4 717 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 ZFYVE28Q9HCC9 887 aa8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 TRMT112Q9UI30 125 aaKnown RBP8.62□□□□□ -1.03
LRTOMT-215ENST00000538478 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 SGPL1O95470 568 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 SYN1P17600 705 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 GRK4P32298 578 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 RPS8P62241 208 aaKnown RBP8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 ARHGEF6Q15052 776 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 NBPF12Q5TAG4 269 aaPredicted RBP8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 DIS3LQ8TF46 1054 aaKnown RBP8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 OPTNQ96CV9 577 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 ELP3Q9H9T3 547 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 SEC31BQ9NQW1 1179 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 SRRDQ9UH36 339 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 RIPOR2Q9Y4F9 1068 aa8.61□□□□□ -1.03
LRTOMT-215ENST00000538478 COL2A1P02458 1487 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 CCL15-CCL14A0A0B4J2E2 113 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 TLR2O60603 784 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 OSBPP22059 807 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 CCL15Q16663 113 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 FAM109BQ6ICB4 259 aaPredicted RBP8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 C7orf61Q8IZ16 206 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 FAM89AQ96GI7 184 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 PAWRQ96IZ0 340 aaKnown RBP8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
LRTOMT-215ENST00000538478 UNCXA6NJT0 531 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 FOSBP53539 338 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 PRMT2P55345 433 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 PODNQ7Z5L7 613 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 DDX12PQ92771 950 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 CDX2Q99626 313 aaPredicted RBP8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 DNAH12Q6ZR08 3092 aa8.59□□□□□ -1.03
LRTOMT-215ENST00000538478 COL1A1P02452 1464 aaPredicted RBP8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 GNRH1P01148 92 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 PSMC4P43686 418 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 TCF20Q9UGU0 1960 aaKnown RBP8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 SPEF2Q9C093 1822 aa8.58□□□□□ -1.04
LRTOMT-215ENST00000538478 TMEM265A0A087WTH1 108 aa8.57□□□□□ -1.04
LRTOMT-215ENST00000538478 BTBD19C9JJ37 291 aa8.57□□□□□ -1.04
LRTOMT-215ENST00000538478 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms