RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 FBF1Q8TES7 1133 aa7.16□□□□□ -1.26
ITGB1-219ENST00000534049 TMEM238LA0A1B0GVL6 79 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 PREPP48147 710 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 DSC3Q14574 896 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 SPRED3Q2MJR0 410 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 FAM20CQ8IXL6 584 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 CORO1BQ9BR76 489 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 YIPF2Q9BWQ6 316 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 ABCB6Q9NP58 842 aa7.15□□□□□ -1.26
ITGB1-219ENST00000534049 BMP3P12645 472 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 POU4F3Q15319 338 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
ITGB1-219ENST00000534049 ZNF423Q2M1K9 1284 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 ARTNQ5T4W7 220 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 C12orf50Q8NA57 414 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-219ENST00000534049 ASB16Q96NS5 453 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 FAM83CQ9BQN1 747 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 NRSN2Q9GZP1 204 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 ZFP64Q9NPA5 681 aa7.14□□□□□ -1.27
ITGB1-219ENST00000534049 SYNGAP1Q96PV0 1343 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 TIAF1O95411 115 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 GRM2Q14416 872 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 RNF43Q68DV7 783 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 BEND4Q6ZU67 534 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 GIMAP7Q8NHV1 300 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 DBNDD2Q9BQY9 259 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 KCNF1Q9H3M0 494 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 C7orf69Q9H7B7 122 aa7.13□□□□□ -1.27
ITGB1-219ENST00000534049 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 GIPC1O14908 333 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 MAOBP27338 520 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 FGD1P98174 961 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 ATP2B2Q01814 1243 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 NFIAQ12857 509 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 ALG1LQ6GMV1 187 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 DTHD1Q6ZMT9 781 aa7.12□□□□□ -1.27
ITGB1-219ENST00000534049 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
ITGB1-219ENST00000534049 PDIA4P13667 645 aaKnown RBP7.11□□□□□ -1.27
ITGB1-219ENST00000534049 GRIK1P39086 918 aa7.11□□□□□ -1.27
ITGB1-219ENST00000534049 USP11P51784 963 aa7.11□□□□□ -1.27
ITGB1-219ENST00000534049 FMR1Q06787 632 aaKnown RBP eCLIP7.11□□□□□ -1.27
ITGB1-219ENST00000534049 CPSF6Q16630 551 aaKnown RBP eCLIP7.11□□□□□ -1.27
ITGB1-219ENST00000534049 GLIS3Q8NEA6 775 aa7.11□□□□□ -1.27
ITGB1-219ENST00000534049 MAP4P27816 1152 aaKnown RBP7.1□□□□□ -1.27
ITGB1-219ENST00000534049 SOX4Q06945 474 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-219ENST00000534049 XP32Q5T750 250 aa7.1□□□□□ -1.27
ITGB1-219ENST00000534049 TRIM42Q8IWZ5 723 aa7.1□□□□□ -1.27
ITGB1-219ENST00000534049 TRIM56Q9BRZ2 755 aaKnown RBP7.1□□□□□ -1.27
ITGB1-219ENST00000534049 BCO2Q9BYV7 579 aa7.1□□□□□ -1.27
ITGB1-219ENST00000534049 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
ITGB1-219ENST00000534049 ADH5P11766 374 aa7.09□□□□□ -1.27
ITGB1-219ENST00000534049 RXRBP28702 533 aa7.09□□□□□ -1.27
ITGB1-219ENST00000534049 INTS5Q6P9B9 1019 aaKnown RBP7.09□□□□□ -1.27
ITGB1-219ENST00000534049 PAOXQ6QHF9 649 aa7.09□□□□□ -1.27
ITGB1-219ENST00000534049 NBPF11Q86T75 865 aa7.09□□□□□ -1.27
ITGB1-219ENST00000534049 TMEM39AQ9NV64 488 aa7.09□□□□□ -1.27
ITGB1-219ENST00000534049 CCDC180Q9P1Z9 1646 aa7.09□□□□□ -1.28
ITGB1-219ENST00000534049 FAM95CA0A1B0GW59 222 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 HMX2A2RU54 273 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 DLGAP3O95886 979 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 GSTT1P30711 240 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 MAPK8P45983 427 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 FCGRTP55899 365 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.08□□□□□ -1.28
ITGB1-219ENST00000534049 C2CD4AQ8NCU7 369 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-219ENST00000534049 FRMD6Q96NE9 622 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 KRT82Q9NSB4 513 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 PPM1HQ9ULR3 514 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
ITGB1-219ENST00000534049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-219ENST00000534049 COBLO75128 1261 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 MAP7Q14244 749 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 PDE3AQ14432 1141 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 COL19A1Q14993 1142 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 EZH1Q92800 747 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-219ENST00000534049 METTL22Q9BUU2 404 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-219ENST00000534049 CEP44Q9C0F1 390 aa7.07□□□□□ -1.28
ITGB1-219ENST00000534049 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-219ENST00000534049 HYAL3O43820 417 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-219ENST00000534049 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 ANKRD24Q8TF21 1146 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 PCMTD2Q9NV79 361 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 SAMM50Q9Y512 469 aa7.06□□□□□ -1.28
ITGB1-219ENST00000534049 GSTP1P09211 210 aaKnown RBP7.05□□□□□ -1.28
ITGB1-219ENST00000534049 DRD2P14416 443 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 CD97P48960 835 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 AKAP4Q5JQC9 854 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 PI16Q6UXB8 463 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
ITGB1-219ENST00000534049 ATG3Q9NT62 314 aa7.05□□□□□ -1.28
ITGB1-219ENST00000534049 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms