RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	COPRS	Q9NQ92	184 aa		12.03	□□□□□ -0.48
SSBP3-215	ENST00000533946	HDAC9	Q9UKV0	1011 aa		12.03	□□□□□ -0.48
SSBP3-215	ENST00000533946	ZBED9	Q6R2W3	1325 aa		12.03	□□□□□ -0.48
SSBP3-215	ENST00000533946	KIF16B	Q96L93	1317 aa		12.03	□□□□□ -0.48
SSBP3-215	ENST00000533946	PRDX5	P30044	214 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	MAP2K1	Q02750	393 aa	Predicted RBP	12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	TTLL12	Q14166	644 aa	Predicted RBP	12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	SPDYE2	Q495Y8	402 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	ZKSCAN2	Q63HK3	967 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	VPS37D	Q86XT2	251 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	ZFPM1	Q8IX07	1006 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	ZNF384	Q8TF68	577 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	LPIN2	Q92539	896 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	AIDA	Q96BJ3	306 aa		12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	ANGEL1	Q9UNK9	670 aa	Known RBP	12.02	□□□□□ -0.49
SSBP3-215	ENST00000533946	ZBTB7B	O15156	539 aa	Predicted RBP	12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	USP2	O75604	605 aa	Predicted RBP	12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	TRPA1	O75762	1119 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	CIAO1	O76071	339 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	MTX1	Q13505	466 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	LDLRAD1	Q5T700	205 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	C20orf194	Q5TEA3	1177 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	PRDM10	Q9NQV6	1147 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	RNF186	Q9NXI6	227 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	CEP126	Q9P2H0	1117 aa		12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.01	□□□□□ -0.49
SSBP3-215	ENST00000533946	FRAT2	O75474	233 aa	Predicted RBP	12	□□□□□ -0.49
SSBP3-215	ENST00000533946	GNAI2	P04899	355 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	IFIT1	P09914	478 aa	Known RBP	12	□□□□□ -0.49
SSBP3-215	ENST00000533946	SLC5A1	P13866	664 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	NOG	Q13253	232 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	CAVIN4	Q5BKX8	364 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	CCDC102B	Q68D86	513 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	TBC1D9	Q6ZT07	1266 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	APOBEC3F	Q8IUX4	373 aa	Known RBP	12	□□□□□ -0.49
SSBP3-215	ENST00000533946	XAGE2	Q96GT9	111 aa		12	□□□□□ -0.49
SSBP3-215	ENST00000533946	AKAP11	Q9UKA4	1901 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946		A0A1B0GUL7	405 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	GNAI3	P08754	354 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	IL15	P40933	162 aa	Predicted RBP	11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	CAP1	Q01518	475 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	NFIA	Q12857	509 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	RASGRF1	Q13972	1273 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	POLA2	Q14181	598 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	TLR7	Q9NYK1	1049 aa	Known RBP	11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	SERPINA10	Q9UK55	444 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	DAGLA	Q9Y4D2	1042 aa		11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	TNRC18	O15417	2968 aa	Predicted RBP	11.99	□□□□□ -0.49
SSBP3-215	ENST00000533946	IPO8	O15397	1037 aa	Known RBP	11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	TBC1D8	O95759	1140 aa		11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	ITPRIP	Q8IWB1	547 aa		11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	CCDC102A	Q96A19	550 aa		11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	NDUFB9	Q9Y6M9	179 aa		11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	MYH2	Q9UKX2	1941 aa		11.98	□□□□□ -0.49
SSBP3-215	ENST00000533946	ATP8B2	P98198	1209 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	TCP10	Q12799	353 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	CDC42EP5	Q6NZY7	148 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	SIRT2	Q8IXJ6	389 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	NEUROD6	Q96NK8	337 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	SNRK	Q9NRH2	765 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	FAM198A	Q9UFP1	575 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	BRCA2	P51587	3418 aa		11.97	□□□□□ -0.49
SSBP3-215	ENST00000533946	SPRYD7	Q5W111	196 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	MIGA2	Q7L4E1	593 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	SSH3	Q8TE77	659 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	TEKT1	Q969V4	418 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	ZDHHC15	Q96MV8	337 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	PTPN18	Q99952	460 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	DBNDD2	Q9BQY9	259 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	ELP3	Q9H9T3	547 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	HMG20B	Q9P0W2	317 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	COG6	Q9Y2V7	657 aa		11.96	□□□□□ -0.49
SSBP3-215	ENST00000533946	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	MCAM	P43121	646 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	FKBP1B	P68106	108 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	MAP3K11	Q16584	847 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	CEP85	Q6P2H3	762 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	SH3BP5L	Q7L8J4	393 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	WNK4	Q96J92	1243 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	BEGAIN	Q9BUH8	593 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	MCOLN1	Q9GZU1	580 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	DDX4	Q9NQI0	724 aa	Known RBP	11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	FBXO3	Q9UK99	471 aa		11.95	□□□□□ -0.5
SSBP3-215	ENST00000533946	MKI67	P46013	3256 aa	Known RBP	11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	MYO1B	O43795	1136 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	SURF6	O75683	361 aa	Known RBP	11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	HHIPL2	Q6UWX4	724 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	ARMC9	Q7Z3E5	817 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	FTSJ3	Q8IY81	847 aa	Known RBP	11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	WDR66	Q8TBY9	1149 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	TBC1D22A	Q8WUA7	517 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	SLC10A4	Q96EP9	437 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	ABHD8	Q96I13	439 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	ABCF2	Q9UG63	623 aa		11.94	□□□□□ -0.5
SSBP3-215	ENST00000533946	EXOC6B	Q9Y2D4	811 aa		11.94	□□□□□ -0.5

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