RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 RASGRF1Q13972 1273 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 SPTY2D1Q68D10 685 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 ZBED3Q96IU2 234 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 PRMT6Q96LA8 375 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-227ENST00000533909 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 TLL2Q9Y6L7 1015 aa16.44■□□□□ 0.22
CAPN1-227ENST00000533909 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
CAPN1-227ENST00000533909 ECE1P42892 770 aa16.43■□□□□ 0.22
CAPN1-227ENST00000533909 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
CAPN1-227ENST00000533909 GRIK5Q16478 980 aa16.43■□□□□ 0.22
CAPN1-227ENST00000533909 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
CAPN1-227ENST00000533909 HUNKP57058 714 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 PRAMEF18Q5VWM3 479 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
CAPN1-227ENST00000533909 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-227ENST00000533909 PDS5AQ29RF7 1337 aaKnown RBP16.42■□□□□ 0.22
CAPN1-227ENST00000533909 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
CAPN1-227ENST00000533909 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-227ENST00000533909 TNNI2P48788 182 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 VEGFBP49765 207 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 AACSQ86V21 672 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
CAPN1-227ENST00000533909 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 DBNDD2Q9BQY9 259 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 MRIQ9BWK5 157 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-227ENST00000533909 TDRD3Q9H7E2 651 aaKnown RBP16.41■□□□□ 0.22
CAPN1-227ENST00000533909 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-227ENST00000533909 PPP2R3BQ9Y5P8 575 aa16.41■□□□□ 0.22
CAPN1-227ENST00000533909 RAB11FIP3O75154 756 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-227ENST00000533909 PRDX5P30044 214 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 FKBP1BP68106 108 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 HHIPL2Q6UWX4 724 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 RHPN1Q8TCX5 695 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 CAPNS2Q96L46 248 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
CAPN1-227ENST00000533909 ZBTB22O15209 634 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 IFIT2P09913 472 aaKnown RBP16.39■□□□□ 0.21
CAPN1-227ENST00000533909 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 SUPT20HL1Q3ZLR7 823 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 CYP4F22Q6NT55 531 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
CAPN1-227ENST00000533909 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
CAPN1-227ENST00000533909 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 GSTO1P78417 241 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 RASA3Q14644 834 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-227ENST00000533909 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
CAPN1-227ENST00000533909 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
CAPN1-227ENST00000533909 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-227ENST00000533909 MCAMP43121 646 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 ZNF157P51786 506 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-227ENST00000533909 PRKG1Q13976 671 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 ARMC9Q7Z3E5 817 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 TLR7Q9NYK1 1049 aaKnown RBP16.37■□□□□ 0.21
CAPN1-227ENST00000533909 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 AOX1Q06278 1338 aa16.37■□□□□ 0.21
CAPN1-227ENST00000533909 CACNB3P54284 484 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
CAPN1-227ENST00000533909 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 CCDC102AQ96A19 550 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 ZNF512BQ96KM6 892 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-227ENST00000533909 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
CAPN1-227ENST00000533909 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
CAPN1-227ENST00000533909 LDHCP07864 332 aa16.35■□□□□ 0.21
CAPN1-227ENST00000533909 MECOMQ03112 1051 aa16.35■□□□□ 0.21
CAPN1-227ENST00000533909 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
CAPN1-227ENST00000533909 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
CAPN1-227ENST00000533909 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
CAPN1-227ENST00000533909 PAPPA2Q9BXP8 1791 aa16.35■□□□□ 0.21
CAPN1-227ENST00000533909 UBE2Q2LH0YL09 131 aa16.34■□□□□ 0.21
CAPN1-227ENST00000533909 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-227ENST00000533909 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
CAPN1-227ENST00000533909 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
CAPN1-227ENST00000533909 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms