RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TLL2Q9Y6L7 1015 aa25.17■■□□□ 1.62
CCS-208ENST00000533244 PRDX5P30044 214 aa25.16■■□□□ 1.62
CCS-208ENST00000533244 GORABQ5T7V8 394 aa25.16■■□□□ 1.62
CCS-208ENST00000533244 RHPN1Q8TCX5 695 aa25.16■■□□□ 1.62
CCS-208ENST00000533244 ZNF408Q9H9D4 720 aa25.16■■□□□ 1.62
CCS-208ENST00000533244 HMG20BQ9P0W2 317 aa25.16■■□□□ 1.62
CCS-208ENST00000533244 DBNLQ9UJU6 430 aaKnown RBP25.16■■□□□ 1.62
CCS-208ENST00000533244 SCAF8Q9UPN6 1271 aaKnown RBP25.16■■□□□ 1.62
CCS-208ENST00000533244 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCS-208ENST00000533244 JMYQ8N9B5 988 aa25.15■■□□□ 1.62
CCS-208ENST00000533244 TEKT1Q969V4 418 aa25.15■■□□□ 1.62
CCS-208ENST00000533244 MYO1BO43795 1136 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 UQCRFS1P1P0C7P4 283 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 SPDYE2Q495Y8 402 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 HHIPL2Q6UWX4 724 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 SAPCD2Q86UD0 394 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 ZGPATQ8N5A5 531 aaKnown RBP25.14■■□□□ 1.62
CCS-208ENST00000533244 KIF1BPQ96EK5 621 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 ZNF512BQ96KM6 892 aaPredicted RBP25.14■■□□□ 1.62
CCS-208ENST00000533244 ZDHHC15Q96MV8 337 aa25.14■■□□□ 1.62
CCS-208ENST00000533244 TLR7Q9NYK1 1049 aaKnown RBP25.14■■□□□ 1.62
CCS-208ENST00000533244 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
CCS-208ENST00000533244 ABT1Q9ULW3 272 aaKnown RBP25.14■■□□□ 1.62
CCS-208ENST00000533244 CLRN2A0PK11 232 aa25.13■■□□□ 1.61
CCS-208ENST00000533244 RAB11FIP3O75154 756 aa25.13■■□□□ 1.61
CCS-208ENST00000533244 LDHBP07195 334 aaKnown RBP25.13■■□□□ 1.61
CCS-208ENST00000533244 MCAMP43121 646 aa25.13■■□□□ 1.61
CCS-208ENST00000533244 SPATA5Q8NB90 893 aa25.13■■□□□ 1.61
CCS-208ENST00000533244 AKAP11Q9UKA4 1901 aa25.13■■□□□ 1.61
CCS-208ENST00000533244 PI16Q6UXB8 463 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 HHIPL1Q96JK4 782 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 CRBNQ96SW2 442 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 DEFB115Q30KQ5 88 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 CCDC158Q5M9N0 1113 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 APOBEC3HQ6NTF7 200 aaKnown RBP25.12■■□□□ 1.61
CCS-208ENST00000533244 CCDC8Q9H0W5 538 aaPredicted RBP25.12■■□□□ 1.61
CCS-208ENST00000533244 TDRD3Q9H7E2 651 aaKnown RBP25.12■■□□□ 1.61
CCS-208ENST00000533244 GBA2Q9HCG7 927 aaPredicted RBP25.12■■□□□ 1.61
CCS-208ENST00000533244 ZNF70Q9UC06 446 aaPredicted RBP25.12■■□□□ 1.61
CCS-208ENST00000533244 PPP2R3BQ9Y5P8 575 aa25.12■■□□□ 1.61
CCS-208ENST00000533244 PAPPA2Q9BXP8 1791 aa25.11■■□□□ 1.61
CCS-208ENST00000533244 DEFB129Q9H1M3 183 aa25.11■■□□□ 1.61
CCS-208ENST00000533244 IL1RAPL2Q9NP60 686 aa25.11■■□□□ 1.61
CCS-208ENST00000533244 PCDHB15Q9Y5E8 787 aa25.11■■□□□ 1.61
CCS-208ENST00000533244 TTC39AQ5SRH9 613 aa25.1■■□□□ 1.61
CCS-208ENST00000533244 PRAMEF18Q5VWM3 479 aa25.1■■□□□ 1.61
CCS-208ENST00000533244 AACSQ86V21 672 aa25.1■■□□□ 1.61
CCS-208ENST00000533244 VEGFBP49765 207 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 DIXDC1Q155Q3 683 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 SPTY2D1Q68D10 685 aaPredicted RBP25.09■■□□□ 1.61
CCS-208ENST00000533244 C2orf69Q8N8R5 385 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 VEZTQ9HBM0 779 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 ABCF2Q9UG63 623 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 DAGLAQ9Y4D2 1042 aa25.09■■□□□ 1.61
CCS-208ENST00000533244 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.61
CCS-208ENST00000533244 FKBP1BP68106 108 aa25.08■■□□□ 1.61
CCS-208ENST00000533244 CLASRPQ8N2M8 674 aaKnown RBP25.08■■□□□ 1.61
CCS-208ENST00000533244 GAKO14976 1311 aa25.07■■□□□ 1.6
CCS-208ENST00000533244 APBB1O00213 710 aa25.07■■□□□ 1.6
CCS-208ENST00000533244 DCTPP1Q9H773 170 aa25.07■■□□□ 1.6
CCS-208ENST00000533244 SSC5DA1L4H1 1573 aa25.07■■□□□ 1.6
CCS-208ENST00000533244 MYH2Q9UKX2 1941 aa25.07■■□□□ 1.6
CCS-208ENST00000533244 HUNKP57058 714 aa25.06■■□□□ 1.6
CCS-208ENST00000533244 TNFAIP1Q13829 316 aa25.06■■□□□ 1.6
CCS-208ENST00000533244 ZNF384Q8TF68 577 aa25.06■■□□□ 1.6
CCS-208ENST00000533244 FAM163AQ96GL9 167 aaPredicted RBP25.06■■□□□ 1.6
CCS-208ENST00000533244 PCNTO95613 3336 aa25.06■■□□□ 1.6
CCS-208ENST00000533244 RASA3Q14644 834 aa25.05■■□□□ 1.6
CCS-208ENST00000533244 FKBP1CQ5VVH2 108 aa25.05■■□□□ 1.6
CCS-208ENST00000533244 TBC1D9Q6ZT07 1266 aa25.05■■□□□ 1.6
CCS-208ENST00000533244 ERICH6Q7L0X2 663 aa25.05■■□□□ 1.6
CCS-208ENST00000533244 WDR33Q9C0J8 1336 aaKnown RBP25.05■■□□□ 1.6
CCS-208ENST00000533244 DZIP1Q86YF9 867 aaKnown RBP25.04■■□□□ 1.6
CCS-208ENST00000533244 CAPNS2Q96L46 248 aa25.04■■□□□ 1.6
CCS-208ENST00000533244 SNRKQ9NRH2 765 aa25.04■■□□□ 1.6
CCS-208ENST00000533244 MAST2Q6P0Q8 1798 aa25.04■■□□□ 1.6
CCS-208ENST00000533244 CYP2E1P05181 493 aaPredicted RBP25.03■■□□□ 1.6
CCS-208ENST00000533244 NF2P35240 595 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 ECE1P42892 770 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 MECOMQ03112 1051 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 AAMPQ13685 434 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 CYP4F22Q6NT55 531 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 TEPSINQ96N21 525 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 LRRCC1Q9C099 1032 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 ZAP70P43403 619 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 SLF2Q8IX21 1173 aa25.03■■□□□ 1.6
CCS-208ENST00000533244 NSUN4Q96CB9 384 aaKnown RBP25.03■■□□□ 1.6
CCS-208ENST00000533244 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
CCS-208ENST00000533244 MROH7-TTC4A0A0A0MT08 1334 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 TCP10L2B9ZVM9 353 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 IGSF3O75054 1194 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 TNNI2P48788 182 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 CACNB3P54284 484 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 CDC42EP5Q6NZY7 148 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 FAM83AQ86UY5 434 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 TMOD2Q9NZR1 351 aa25.02■■□□□ 1.6
CCS-208ENST00000533244 IFIT2P09913 472 aaKnown RBP25.01■■□□□ 1.59
CCS-208ENST00000533244 NBPF12Q5TAG4 269 aaPredicted RBP25.01■■□□□ 1.59
CCS-208ENST00000533244 RGMBQ6NW40 437 aa25.01■■□□□ 1.59
CCS-208ENST00000533244 MOB2Q70IA6 237 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms